RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TREM1Q9NP99 234 aa9.86□□□□□ -0.83
SHMT2-234ENST00000557703 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 LOC102723971A0A1B0GUV8 181 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 CXorf65A6NEN9 183 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 NDUFS6O75380 124 aaKnown RBP9.85□□□□□ -0.83
SHMT2-234ENST00000557703 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
SHMT2-234ENST00000557703 ALKAL2Q6UX46 152 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 COX8CQ7Z4L0 72 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 RPH3ALQ9UNE2 315 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
SHMT2-234ENST00000557703 TRAV21A0A0B4J279 112 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 PDE6DO43924 150 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 UBE2G1P62253 170 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 GNG5P63218 68 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 TDRG1Q3Y452 100 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 IBA57Q5T440 356 aaKnown RBP9.84□□□□□ -0.83
SHMT2-234ENST00000557703 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
SHMT2-234ENST00000557703 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
SHMT2-234ENST00000557703 TIMM8BQ9Y5J9 83 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-234ENST00000557703 NUPR2A6NF83 97 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 RGS13O14921 159 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 TMEM183BQ1AE95 376 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 SMUG1Q53HV7 270 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 Q8TAT8 98 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
SHMT2-234ENST00000557703 KCNS1Q96KK3 526 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
SHMT2-234ENST00000557703 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 ZNF705GA8MUZ8 300 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-234ENST00000557703 TCTAP57738 103 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-234ENST00000557703 DAZ2Q13117 558 aaKnown RBP9.82□□□□□ -0.84
SHMT2-234ENST00000557703 BTN1A1Q13410 526 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 FAM159AQ6UWV7 190 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 VAX2Q9UIW0 290 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 DNAH7Q8WXX0 4024 aa9.82□□□□□ -0.84
SHMT2-234ENST00000557703 SNURFLB1AK76 121 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 J3KRW8 73 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 PFN1P07737 140 aaKnown RBP9.81□□□□□ -0.84
SHMT2-234ENST00000557703 BCL2P10415 239 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 AKR1C3P42330 323 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 ATP5G3P48201 142 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 CCL20P78556 96 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 C2CD4CQ8TF44 421 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 C11orf52Q96A22 123 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 SMIM12Q96EX1 92 aa9.81□□□□□ -0.84
SHMT2-234ENST00000557703 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-234ENST00000557703 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 A0A1B0GV50 99 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 CBY3A6NI87 242 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 FABP5P3A8MUU1 101 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 LTAP01374 205 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 PRB4P10163 310 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-234ENST00000557703 HTN1P15515 57 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 FAM222AQ5U5X8 452 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 TVP23CQ96ET8 276 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 FAM210BQ96KR6 192 aa9.8□□□□□ -0.84
SHMT2-234ENST00000557703 TRAV10A0A0B4J240 114 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 DEFB4AO15263 64 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 AZU1P20160 251 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 LGALS9BQ3B8N2 356 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 PRR9Q5T870 116 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-234ENST00000557703 Q86TA4 180 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 SPXQ9BT56 116 aa9.79□□□□□ -0.84
SHMT2-234ENST00000557703 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 GCGP01275 180 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 EMP1P54849 157 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 TCL1AP56279 114 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 DAD1P61803 113 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 PHLDA1Q8WV24 401 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-234ENST00000557703 LINC00479Q96M42 142 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 NDUFAF3Q9BU61 184 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 SDF2L1Q9HCN8 221 aa9.78□□□□□ -0.84
SHMT2-234ENST00000557703 TRAV34A0A0B4J273 112 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 RBFOX3A6NFN3 312 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
SHMT2-234ENST00000557703 ZNF415Q09FC8 603 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 C12orf74Q32Q52 190 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 LINC00612Q8N6U2 182 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 SGK494Q96LW2 274 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 SMDT1Q9H4I9 107 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 BIN3Q9NQY0 253 aa9.77□□□□□ -0.85
SHMT2-234ENST00000557703 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
SHMT2-234ENST00000557703 ZNF674Q2M3X9 581 aa9.76□□□□□ -0.85
SHMT2-234ENST00000557703 BAGE2Q86Y30 109 aa9.76□□□□□ -0.85
SHMT2-234ENST00000557703 MLST8Q9BVC4 326 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms