RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MRPL36Q9P0J6 103 aaKnown RBP7.18□□□□□ -1.26
SYNE3-205ENST00000557275 IGLV3-32A0A0A0MS00 114 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 KIF26AQ9ULI4 1882 aaPredicted RBP7.17□□□□□ -1.26
SYNE3-205ENST00000557275 CENPVL1A0A0U1RR11 272 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV1-3A0A0C4DH29 117 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 E9PLN8 166 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 FOXI2Q6ZQN5 318 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 LHFPL1Q86WI0 220 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 C1QL2Q7Z5L3 287 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 MDS2Q8NDY4 140 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 SMIM10L1P0DMW3 83 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 SMIM10Q96HG1 83 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 SPAARA0A1B0GVQ0 90 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 WBP1Q96G27 269 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 SPSB2Q99619 263 aa7.17□□□□□ -1.26
SYNE3-205ENST00000557275 BTCP35070 178 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 ZNF134P52741 427 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 UQCRQO14949 82 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 DKK4Q9UBT3 224 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 IGLL5B9A064 214 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 C3orf36Q3SXR2 165 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 Q6ZWC4 215 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 ZCCHC24Q8N2G6 241 aaKnown RBP7.16□□□□□ -1.26
SYNE3-205ENST00000557275 TRAV3A0A0B4J244 114 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV2-70DA0A0C4DH43 119 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 F5H768 121 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 PSPNO60542 156 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 H0YJW9 148 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 PLA2G2FQ9BZM2 168 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 NDUFA4O00483 81 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
SYNE3-205ENST00000557275 CFHR1Q03591 330 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 A0A087WWL8 130 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 C12orf74Q32Q52 190 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 SAP25Q8TEE9 199 aa7.16□□□□□ -1.26
SYNE3-205ENST00000557275 DUX4L9Q6RFH8 374 aaPredicted RBP7.15□□□□□ -1.26
SYNE3-205ENST00000557275 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 WIPF2Q8TF74 440 aaPredicted RBP7.15□□□□□ -1.26
SYNE3-205ENST00000557275 IGKV1D-13A0A0B4J2D9 117 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 IGKV1-13P0DP09 117 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 ATG2AQ2TAZ0 1938 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 DEFB130BP0DP73 79 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 DEFB130AP0DP74 79 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 RHPN1-AS1Q9BWJ2 59 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 THSD7AQ9UPZ6 1657 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 LTBRP36941 435 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 EFNA4P52798 201 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 SIP14410 1827 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV1OR15-1A0A075B7D0 117 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 ZMAT4Q9H898 229 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 PRDM6Q9NQX0 595 aa7.15□□□□□ -1.26
SYNE3-205ENST00000557275 TMEM14BQ9NUH8 114 aa7.15□□□□□ -1.27
SYNE3-205ENST00000557275 CRYGSP22914 178 aa7.15□□□□□ -1.27
SYNE3-205ENST00000557275 COLQQ9Y215 455 aaPredicted RBP7.15□□□□□ -1.27
SYNE3-205ENST00000557275 NSUN5P1Q3KNT7 163 aa7.15□□□□□ -1.27
SYNE3-205ENST00000557275 BUB1B-PAK6H3BSN5 160 aa7.15□□□□□ -1.27
SYNE3-205ENST00000557275 DAZ2Q13117 558 aaKnown RBP7.15□□□□□ -1.27
SYNE3-205ENST00000557275 DAZ4Q86SG3 579 aaKnown RBP7.15□□□□□ -1.27
SYNE3-205ENST00000557275 DAZ3Q9NR90 486 aaKnown RBP7.15□□□□□ -1.27
SYNE3-205ENST00000557275 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.27
SYNE3-205ENST00000557275 IGHV3OR16-10A0A075B7F0 116 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 ZNF362Q5T0B9 420 aaPredicted RBP7.14□□□□□ -1.27
SYNE3-205ENST00000557275 TANC1Q9C0D5 1861 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 ETV2O00321 342 aaPredicted RBP7.14□□□□□ -1.27
SYNE3-205ENST00000557275 LTAP01374 205 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 CR1LQ2VPA4 569 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 WFDC11Q8NEX6 87 aa7.14□□□□□ -1.27
SYNE3-205ENST00000557275 TRBV12-3P01733 135 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 LAIR2Q6ISS4 152 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 ANGP03950 147 aaKnown RBP7.13□□□□□ -1.27
SYNE3-205ENST00000557275 NTN5Q8WTR8 489 aaPredicted RBP7.13□□□□□ -1.27
SYNE3-205ENST00000557275 ZFHX2Q9C0A1 2572 aaPredicted RBP7.13□□□□□ -1.27
SYNE3-205ENST00000557275 Q8TAT8 98 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 LINC01560Q8TB33 94 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 ZFP36L1Q07352 338 aaKnown RBP7.13□□□□□ -1.27
SYNE3-205ENST00000557275 LINC00527Q9UJ94 153 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 CSRP2Q16527 193 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 ANXA2RQ3ZCQ2 193 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 SLC22A18ASQ8N1D0 253 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
SYNE3-205ENST00000557275 DYNAPQ8N1N2 210 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 PLXNA4Q9HCM2 1894 aa7.13□□□□□ -1.27
SYNE3-205ENST00000557275 LINC00643Q86TS7 51 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
SYNE3-205ENST00000557275 ZNF106Q9H2Y7 1883 aaKnown RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 MRPL35Q9NZE8 188 aaKnown RBP7.12□□□□□ -1.27
SYNE3-205ENST00000557275 A4D1N5 150 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms