RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PEF1Q9UBV8 284 aaKnown RBP3.4□□□□□ -1.87
SRP54-212ENST00000556992 NAT8BQ9UHF3 227 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 PSG8Q9UQ74 426 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 SMAD5-AS1Q9Y6J3 95 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 CHD3Q12873 2000 aaKnown RBP3.39□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3-35A0A0C4DH35 117 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 XKRY2A2RUG3 117 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 CLPSL1A2RUU4 121 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 RBAKDNA6NC62 111 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 PHOX2AO14813 284 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 IGLV2-11P01706 119 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 CT45A10P0DMU9 189 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 PSMB8P28062 276 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 S100A2P29034 98 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 BMI1P35226 326 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 AKR1D1P51857 326 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 RPL15P61313 204 aaKnown RBP3.39□□□□□ -1.87
SRP54-212ENST00000556992 SMUG1Q53HV7 270 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 COA6Q5JTJ3 125 aaKnown RBP3.39□□□□□ -1.87
SRP54-212ENST00000556992 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 SAMD13Q5VXD3 122 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 PRR27Q6MZM9 219 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 C16orf54Q6UWD8 224 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 GPHB5Q86YW7 130 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 NHLRC2Q8NBF2 726 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 MRPL53Q96EL3 112 aaKnown RBP3.39□□□□□ -1.87
SRP54-212ENST00000556992 NDFIP1Q9BT67 221 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
SRP54-212ENST00000556992 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 UFC1Q9Y3C8 167 aa3.39□□□□□ -1.87
SRP54-212ENST00000556992 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 A0A1B0GW15 77 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 C19orf71A6NCJ1 209 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 PRSS47A8MTI9 375 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 A8MWP6 167 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 CHEK1O14757 476 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 APCSP02743 223 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 FOXA3P55318 350 aaPredicted RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 RPS20P60866 119 aaKnown RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 RAB4BP61018 213 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 FAM162BQ5T6X4 162 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 RBPMS2Q6ZRY4 209 aaKnown RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 ATP5L2Q7Z4Y8 100 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 Q86TA4 180 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 LINC00518Q8N0U6 118 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 Q8N2B8 174 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 CIARTQ8N365 385 aaPredicted RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 GBGT1Q8N5D6 347 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 RNF152Q8N8N0 203 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 WFDC11Q8NEX6 87 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 OR2D3Q8NGH3 330 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 UBE2E2Q96LR5 201 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 SGK494Q96LW2 274 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 DAZ1Q9NQZ3 744 aaKnown RBP3.38□□□□□ -1.87
SRP54-212ENST00000556992 SMPXQ9UHP9 88 aa3.38□□□□□ -1.87
SRP54-212ENST00000556992 HCFC1P51610 2035 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 JMJD1CQ15652 2540 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 MXRA5Q9NR99 2828 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3OR16-8A0A075B7F1 116 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TMEM189A5PLL7 270 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 FABP5P3A8MUU1 101 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 HIGD1CA8MV81 97 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 M0R3E3 92 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 LGALS9O00182 355 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 OVOL1O14753 267 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 ZNF207O43670 478 aaKnown RBP3.37□□□□□ -1.87
SRP54-212ENST00000556992 CD5LO43866 347 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 IGHV3-11P01762 117 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 HLA-DQA1P01909 254 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 APOHP02749 345 aaPredicted RBP3.37□□□□□ -1.87
SRP54-212ENST00000556992 CRISP2P16562 243 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 CBLN1P23435 193 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 ID1P41134 155 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 ZNF138P52744 262 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TCL1AP56279 114 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 Q0VG73 95 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 RIGQ13278 110 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TMEM78Q5T7P6 136 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 Q6AWC8 147 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 HIST3H2BBQ8N257 126 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 SIGLECL1Q8N7X8 197 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 NUP35Q8NFH5 326 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 GLMPQ8WWB7 406 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 BORCS7Q96B45 105 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 LINC00477Q96M19 166 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 ASCL2Q99929 193 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 RHPN1-AS1Q9BWJ2 59 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 YAE1D1Q9NRH1 226 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 PPP1R14DQ9NXH3 145 aa3.37□□□□□ -1.87
SRP54-212ENST00000556992 TANC2Q9HCD6 1990 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms