RNA–Protein interactions for RNA: ENST00000556787.5

PAPOLA-222, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-222	ENST00000556787	RPL7	P18124	248 aa	Known RBP	0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	CAV3	P56539	151 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	QRFP	P83859	136 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	XAF1	Q6GPH4	301 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	DEFB132	Q7Z7B7	95 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TCTEX1D1	Q8N7M0	179 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TMEM229B	Q8NBD8	167 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	MPC1	Q9Y5U8	109 aa		0.25	□□□□□ -2.37
PAPOLA-222	ENST00000556787	FSIP2	Q5CZC0	6907 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LOC107984640	A0A0U1RRK4	108 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787		H3BMG7	143 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	FAM107A	O95990	144 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	GYPB	P06028	91 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	CCSMST1	Q4G0I0	132 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	GLYATL3	Q5SZD4	288 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LXN	Q9BS40	222 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	CBLN4	Q9NTU7	201 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TRPM7	Q96QT4	1865 aa		0.24	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TNC	P24821	2201 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	ATG2A	Q2TAZ0	1938 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LOC107984156	A0A0G2JMH3	177 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	NBDY	A0A0U1RRE5	68 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LOC107986453	A0A1B0GWG9	222 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787		A0A1W2PPB8	328 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787		A0A1W2PRS3	328 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	ARL5C	A6NH57	179 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	KIR3DP1	A8MWS1	328 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	PFDN1	O60925	122 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LY6G6C	O95867	125 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	SLC25A4	P12235	298 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	CRYGS	P22914	178 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	RPS3	P23396	243 aa	Known RBP eCLIP	0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	SNRPD3	P62318	126 aa	Known RBP	0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	ARL17A	Q8IVW1	177 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	OR51A4	Q8NGJ6	313 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	AP1S3	Q96PC3	154 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	CENPH	Q9H3R5	247 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TRAPPC2L	Q9UL33	140 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	BCORL1	Q5H9F3	1711 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	FAT4	Q6V0I7	4981 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	NIN	Q8N4C6	2090 aa		0.23	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787		A0A1B0GV72	72 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	BBIP1	A8MTZ0	92 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	IGF2	P01344	180 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	EVI2A	P22794	236 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	SRP9	P49458	86 aa	Known RBP	0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	DNAJB13	P59910	316 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TFAM	Q00059	246 aa	Known RBP	0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	TOMM20L	Q6UXN7	152 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	C3orf62	Q6ZUJ4	267 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	NAT14	Q8WUY8	206 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	LINC00208	Q96KT6	92 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	C19orf12	Q9NSK7	152 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	MRPL35	Q9NZE8	188 aa	Known RBP	0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	A2M	P01023	1474 aa		0.22	□□□□□ -2.37
PAPOLA-222	ENST00000556787	WDR97	A6NE52	1622 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	IFITM5	A6NNB3	132 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	BLCAP	P62952	87 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	FXYD3	Q14802	87 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	ASB16-AS1	Q495Z4	193 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	C5orf56	Q8N8D9	126 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	CCDC115	Q96NT0	180 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	COMMD3	Q9UBI1	195 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787		V9GYQ6	96 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	BDP1	A6H8Y1	2624 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	MYH1	P12882	1939 aa		0.21	□□□□□ -2.38
PAPOLA-222	ENST00000556787	LOC101927531	A0A1B0GV80	90 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787		M0QZK8	103 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	IFNA21	P01568	189 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	RPL22	P35268	128 aa	Known RBP	0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	RPL37	P61927	97 aa	Known RBP	0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	TMEM128	Q5BJH2	165 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	OR9Q1	Q8NGQ5	310 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	MRPL36	Q9P0J6	103 aa	Known RBP	0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	RYR1	P21817	5038 aa		0.2	□□□□□ -2.38
PAPOLA-222	ENST00000556787	PRORSD1P	A6NEY8	169 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	PGRMC1	O00264	195 aa	Known RBP	0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	CDC42EP2	O14613	210 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	EDF1	O60869	148 aa	Known RBP	0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	HBD	P02042	147 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	GTF2A1	P52655	376 aa	Predicted RBP	0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	SPINK13	Q1W4C9	94 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	OR5A2	Q8NGI9	324 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	BRK1	Q8WUW1	75 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	DDA1	Q9BW61	102 aa		0.19	□□□□□ -2.38
PAPOLA-222	ENST00000556787	AFDN	P55196	1824 aa	Known RBP	0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	XIRP1	Q702N8	1843 aa	Known RBP	0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	TMEM30CP	A0ZSE6	113 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	TMEM189	A5PLL7	270 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	ETV6	P41212	452 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	ZNF56	Q15929	161 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	SAMD13	Q5VXD3	122 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	LYPD5	Q6UWN5	251 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	SPINK6	Q6UWN8	80 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	OR8J3	Q8NGG0	315 aa		0.18	□□□□□ -2.38
PAPOLA-222	ENST00000556787	MACF1	Q9UPN3	7388 aa	Known RBP	0.17	□□□□□ -2.38
PAPOLA-222	ENST00000556787	HIGD1C	A8MV81	97 aa		0.17	□□□□□ -2.38
PAPOLA-222	ENST00000556787	UQCRQ	O14949	82 aa		0.17	□□□□□ -2.38
PAPOLA-222	ENST00000556787	IGKC	P01834	107 aa		0.17	□□□□□ -2.38

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms