RNA–Protein interactions for RNA: ENST00000556551.2

AC005520.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC005520.1, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005520.1-201ENST00000556551 C15orf32Q32M92 178 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 MRPL35Q9NZE8 188 aaKnown RBP6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 JKAMPQ9P055 326 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 IGKV3D-20A0A0C4DH25 116 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 TEX48A0A1B0GUV7 120 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 GATD1Q8NB37 220 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 CSMD2Q7Z408 3487 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
AC005520.1-201ENST00000556551 FABP2P12104 132 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 CLEC19AQ6UXS0 136 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 NPFFR1Q9GZQ6 430 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 SMIM13P0DJ93 91 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 PAX2Q02962 417 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 OR9G4Q8NGQ1 327 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 RAB1BQ9H0U4 201 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 SORL1Q92673 2214 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 IGHV3OR16-10A0A075B7F0 116 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 FABP5P3A8MUU1 101 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 G3V4G9 280 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 IGKCP01834 107 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 PDE6HQ13956 83 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 AGPAT4-IT1Q9H0P7 198 aa6.73□□□□□ -1.33
AC005520.1-201ENST00000556551 TMEM238C9JI98 176 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 CCL21O00585 134 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 ZFP36P26651 326 aaKnown RBP6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 BMI1P35226 326 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 VMO1Q7Z5L0 202 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 OR4X2Q8NGF9 303 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 IGHV7-81A0A0B4J1V7 117 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 WFDC2Q14508 124 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 H3BMG7 143 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 H3BVH4 76 aa6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
AC005520.1-201ENST00000556551 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.33
AC005520.1-201ENST00000556551 HIVEP3Q5T1R4 2406 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 M0R381 172 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 TMEM219Q86XT9 240 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 NPBQ8NG41 125 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 GLMPQ8WWB7 406 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 DOPEY2Q9Y3R5 2298 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 ATP6V0E1O15342 81 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 CEACAM3P40198 252 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 EMP1P54849 157 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
AC005520.1-201ENST00000556551 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 PRR9Q5T870 116 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 TTC9CQ8N5M4 171 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 OR11H6Q8NGC7 330 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 BUB3O43684 328 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 DPM2O94777 84 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 RNF5Q99942 180 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 CENPEQ02224 2701 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 INSL3P51460 131 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 ETDBQ3ZM63 59 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 LY6G5BQ8NDX9 201 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 DPF1Q92782 380 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 PSMG3-AS1Q96PY0 264 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 HIF1ANQ9NWT6 349 aa6.7□□□□□ -1.34
AC005520.1-201ENST00000556551 FOXC1Q12948 553 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 CLPSL1A2RUU4 121 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 PRTN3P24158 256 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 Q8N9W7 124 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 CYSLTR1Q9Y271 337 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 ODF3BA8MYP8 253 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 F6UB75 175 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 CEND1Q8N111 149 aa6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 PHLDA1Q8WV24 401 aaPredicted RBP6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 SRSF8Q9BRL6 282 aaKnown RBP6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 NXT2Q9NPJ8 142 aaKnown RBP6.69□□□□□ -1.34
AC005520.1-201ENST00000556551 IGLV2-18A0A075B6J9 118 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 SIVA1O15304 175 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 C14orf178Q8N769 122 aaPredicted RBP6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 TIMD4Q96H15 378 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 RPL11P62913 178 aaKnown RBP6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 C8orf86Q6ZUL3 223 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 Q8N8P6 123 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 NRACQ8N912 160 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 ZMAT4Q9H898 229 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 A0A1W2PPR1 153 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 SRD5A1P18405 259 aa6.68□□□□□ -1.34
AC005520.1-201ENST00000556551 LAGE3Q14657 143 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms