RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SRCAPQ6ZRS2 3230 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 DOPEY2Q9Y3R5 2298 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 G3V318 75 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 H0YGX0 51 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 CXCL5P42830 114 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 FXYD7P58549 80 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
ACTN1-216ENST00000556083 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
ACTN1-216ENST00000556083 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
ACTN1-216ENST00000556083 ABCA1O95477 2261 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 C9orf118A6NHY6 69 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 MYCNOSP40205 109 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 NCOR1O75376 2440 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE7O76087 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 OCIAD2Q56VL3 154 aa8.48□□□□□ -1.05
ACTN1-216ENST00000556083 FSTL3O95633 263 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 KRTAP27-1Q3LI81 207 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 COL4A6Q14031 1691 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 MDC1Q14676 2089 aaKnown RBP8.47□□□□□ -1.05
ACTN1-216ENST00000556083 IGLC7A0M8Q6 106 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 J3QQQ9 107 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 A0A087X0K7 114 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 TMEM213A2RRL7 107 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 CCL24O00175 119 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 IGHG4P01861 327 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
ACTN1-216ENST00000556083 MLANAQ16655 118 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 SLC25A29Q8N8R3 303 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 SPTBN2O15020 2390 aa8.47□□□□□ -1.05
ACTN1-216ENST00000556083 PRSS33Q8NF86 280 aa8.46□□□□□ -1.05
ACTN1-216ENST00000556083 POLEQ07864 2286 aa8.46□□□□□ -1.05
ACTN1-216ENST00000556083 ATP5G1P05496 136 aa8.46□□□□□ -1.06
ACTN1-216ENST00000556083 ZNF124Q15973 351 aa8.46□□□□□ -1.06
ACTN1-216ENST00000556083 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.06
ACTN1-216ENST00000556083 WNK2Q9Y3S1 2297 aa8.46□□□□□ -1.06
ACTN1-216ENST00000556083 RSPO1Q2MKA7 263 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-216ENST00000556083 LYPD6BQ8NI32 183 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 C1orf43Q9BWL3 253 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 CCL18P55774 89 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 SIGLEC8Q9NYZ4 499 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 VWA8A3KMH1 1905 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 IGLC3P0DOY3 106 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 PRSS57Q6UWY2 283 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 LY6HO94772 140 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 PRR30Q53SZ7 412 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-216ENST00000556083 ARTNQ5T4W7 220 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 CACNA1HO95180 2353 aa8.45□□□□□ -1.06
ACTN1-216ENST00000556083 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
ACTN1-216ENST00000556083 RNF144BQ7Z419 303 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 GPHB5Q86YW7 130 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 DKK4Q9UBT3 224 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 CACNA1BQ00975 2339 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 CREBBPQ92793 2442 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 C9JQL5 133 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 C10orf105Q8TEF2 133 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 LINC00479Q96M42 142 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 MYO7BQ6PIF6 2116 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 WISP1O95388 367 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 IGFL4Q6B9Z1 124 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 ADAMTSL5Q6ZMM2 481 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 RLFQ13129 1914 aa8.44□□□□□ -1.06
ACTN1-216ENST00000556083 IGLV11-55A0A075B6I3 123 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 CRYGCP07315 174 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 GAGE6Q13070 117 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 DEFB112Q30KQ8 113 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
ACTN1-216ENST00000556083 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 LURAP1LQ8IV03 231 aa8.43□□□□□ -1.06
ACTN1-216ENST00000556083 ADCYAP1P18509 176 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
ACTN1-216ENST00000556083 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 TTC28Q96AY4 2481 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 CEND1Q8N111 149 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 DIDO1Q9BTC0 2240 aaKnown RBP8.42□□□□□ -1.06
ACTN1-216ENST00000556083 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
ACTN1-216ENST00000556083 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
ACTN1-216ENST00000556083 CCL25O15444 150 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms