RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PLAC4Q8WY50 150 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PAIP2Q9BPZ3 127 aaKnown RBP0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LRP1Q07954 4544 aaKnown RBP0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LRP1BQ9NZR2 4599 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 NBPF19A0A087WUL8 3843 aa0.02□□□□□ -2.41
SCFD1-214ENST00000554819 TPRP12270 2363 aaKnown RBP0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MGAMO43451 1857 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CHD7Q9P2D1 2997 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 HECTD4Q9Y4D8 3996 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 ZGRF1Q86YA3 2104 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CUBNO60494 3623 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 RPL37AP61513 92 aaKnown RBP0.01□□□□□ -2.41
SCFD1-214ENST00000554819 MSMO1Q15800 293 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 FKBP1CQ5VVH2 108 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 C10orf99Q6UWK7 81 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 C10orf111Q8N326 155 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 FAM216BQ8N7L0 139 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 MALSU1Q96EH3 234 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CHMP6Q96FZ7 201 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 RMND5BQ96G75 393 aaPredicted RBP0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CCL19Q99731 98 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 NABP2Q9BQ15 211 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 GINS3Q9BRX5 216 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 LIMD2Q9BT23 127 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 RTL8AQ9BWD3 113 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CST11Q9H112 138 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 BOKQ9UMX3 212 aaPredicted RBP0.01□□□□□ -2.41
SCFD1-214ENST00000554819 SSR3Q9UNL2 185 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 EIF3AQ14152 1382 aaKnown RBP0.01□□□□□ -2.41
SCFD1-214ENST00000554819 RTL9Q8NET4 1388 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 NUP98P52948 1817 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 PRKDCP78527 4128 aaKnown RBP0.01□□□□□ -2.41
SCFD1-214ENST00000554819 F8P00451 2351 aa0.01□□□□□ -2.41
SCFD1-214ENST00000554819 DMXL1Q9Y485 3027 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 HSPG2P98160 4391 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 A0A096LPI6 279 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 ODAMA1E959 279 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 GPR31O00270 319 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 PIAS1O75925 651 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 CST7O76096 145 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 IFNA1P01562 189 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 IGHV3-30P01768 117 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SPTA1P02549 2419 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 CSN2P05814 226 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 IGHV3-30-5P0DP03 117 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SPRR2EP22531 72 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SPRR2DP22532 72 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SPRR2BP35325 72 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SPRR2AP35326 72 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 RPL35P42766 123 aaKnown RBP0□□□□□ -2.41
SCFD1-214ENST00000554819 HBBP68871 147 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 DYNC1H1Q14204 4646 aaKnown RBP0□□□□□ -2.41
SCFD1-214ENST00000554819 MYLKQ15746 1914 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 HACD4Q5VWC8 232 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 ZCCHC23Q6ZST2 131 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 Q86TA4 180 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 PRR15Q8IV56 129 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 PLEKHB2Q96CS7 222 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 PBDC1Q9BVG4 233 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 OR2H1Q9GZK4 316 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 SS18L2Q9UHA2 77 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 KIAA1107Q9UPP5 1409 aa0□□□□□ -2.41
SCFD1-214ENST00000554819 UTRNP46939 3433 aa-0□□□□□ -2.41
SCFD1-214ENST00000554819 NBASA2RRP1 2371 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 LYSTQ99698 3801 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 ASPMQ8IZT6 3477 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 PIK3C2AO00443 1686 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 VPS13AQ96RL7 3174 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 HTTP42858 3142 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 FRYLO94915 3013 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 MFSD11O43934 449 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 QRFPP83859 136 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 DIAPH2-AS1Q14236 149 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 SNCBQ16143 134 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 RTL8BQ17RB0 113 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 LELP1Q5T871 98 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 SPINK6Q6UWN8 80 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 OR13C6PQ8NH95 151 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CCL4L1Q8NHW4 92 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CEP19Q96LK0 163 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 MCEEQ96PE7 176 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 EFCAB11Q9BUY7 163 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 CSPG4Q6UVK1 2322 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 ABCA4P78363 2273 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 FAT1Q14517 4588 aa-0.01□□□□□ -2.41
SCFD1-214ENST00000554819 USP34Q70CQ2 3546 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 ALMS1Q8TCU4 4167 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PTPRFP10586 1907 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 ATP5HO75947 161 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 PPP1R2P41236 205 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 GNG3P63215 75 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MRPS36P82909 103 aaKnown RBP-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 MRPS15P82914 257 aaKnown RBP-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 RPL19P84098 196 aaKnown RBP-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 POU6F1Q14863 301 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 LTC4SQ16873 150 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 VMA21Q3ZAQ7 101 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 XAF1Q6GPH4 301 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 GRPEL2Q8TAA5 225 aa-0.02□□□□□ -2.41
SCFD1-214ENST00000554819 DIRC1Q969H9 104 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms