RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RPL12P30050 165 aaKnown RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 C10orf25Q5T742 122 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 C9orf47Q6ZRZ4 202 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 MIR17HGQ75NE6 70 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 C15orf53Q8NAA6 179 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 BLNKQ8WV28 456 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 RPL36ALQ969Q0 106 aaKnown RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 PYGO2Q9BRQ0 406 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 PARD6GQ9BYG4 376 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 OR51M1Q9H341 326 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 FUT9Q9Y231 359 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 TIMM9Q9Y5J7 89 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 PGPEP1LA6NFU8 196 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 OR7C2O60412 319 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 IFNA5P01569 189 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 ATP5G1P05496 136 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 NMBP08949 121 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 NBEAP1P0C6P0 100 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 DEFB130BP0DP73 79 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 DEFB130AP0DP74 79 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 HTN1P15515 57 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 CRISP2P16562 243 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 ATP5G3P48201 142 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 KHDC3LQ587J8 217 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 FFAR4Q5NUL3 377 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 UBE2DNLQ8IWF7 75 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 EXOC3-AS1Q8N2X6 119 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 LINC00612Q8N6U2 182 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 FXYD5Q96DB9 178 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 FAM19A4Q96LR4 140 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 LINC00477Q96M19 166 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 PAXXQ9BUH6 204 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 MSRB1Q9NZV6 116 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 PAM16Q9Y3D7 125 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 ALG5Q9Y673 324 aa5.4□□□□□ -1.54
SNHG1-223ENST00000545440 TRAV12-3A0A0B4J271 114 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 TRBV7-9A0A0J9YWB2 115 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 C7orf71A4D174 169 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 CBY3A6NI87 242 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 SNURFLB1AK76 121 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 OR10J4P0C629 311 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 TAS2R45P59539 299 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 UBE2L3P68036 154 aaKnown RBP5.39□□□□□ -1.55
SNHG1-223ENST00000545440 RNF212Q495C1 297 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 LYPD1Q8N2G4 141 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF680Q8NEM1 530 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 ASB13Q8WXK3 278 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 PHYHIPLQ96FC7 376 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 LINC00467Q9BRT7 94 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 SMIM3Q9BZL3 60 aa5.39□□□□□ -1.55
SNHG1-223ENST00000545440 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
SNHG1-223ENST00000545440 IGKV2-40A0A087WW87 121 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-223ENST00000545440 RBAKDNA6NC62 111 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 F5H768 121 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 IGKV2D-40P01614 121 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-223ENST00000545440 DAZ2Q13117 558 aaKnown RBP5.38□□□□□ -1.55
SNHG1-223ENST00000545440 ERCC8Q13216 396 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF266Q14584 549 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 FCN2Q15485 313 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 LGALS9BQ3B8N2 356 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 PQLC2Q6ZP29 291 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 ZFAND2AQ8N6M9 145 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 AQP10Q96PS8 301 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 AGPAT4-IT1Q9H0P7 198 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 MED28Q9H204 178 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF492Q9P255 531 aa5.38□□□□□ -1.55
SNHG1-223ENST00000545440 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF324O75467 553 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-223ENST00000545440 GPX1P07203 203 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 M6PRP20645 277 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 CSN1S1P47710 185 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 CD300CQ08708 224 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 BTN1A1Q13410 526 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 ACOT6Q3I5F7 207 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-223ENST00000545440 IBA57Q5T440 356 aaKnown RBP5.37□□□□□ -1.55
SNHG1-223ENST00000545440 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 Q6ZR54 194 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 EIF4E3Q8N5X7 224 aaKnown RBP5.37□□□□□ -1.55
SNHG1-223ENST00000545440 C11orf72Q8NBR9 251 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 OR2G3Q8NGZ4 309 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 RXFP4Q8TDU9 374 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 C18orf15Q96N68 181 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 VGLL1Q99990 258 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 PSMG3Q9BT73 122 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-223ENST00000545440 Q9H3A6 140 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 WFDC1Q9HC57 220 aa5.37□□□□□ -1.55
SNHG1-223ENST00000545440 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 A0A1W2PPV4 95 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 GIPP09681 153 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-223ENST00000545440 RNASE4P34096 147 aaKnown RBP5.36□□□□□ -1.55
SNHG1-223ENST00000545440 ZNF138P52744 262 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 TCL1AP56279 114 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 RAB2AP61019 212 aa5.36□□□□□ -1.55
SNHG1-223ENST00000545440 RANP62826 216 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms