RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 C7orf71A4D174 169 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 H3BRN7 92 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 MPDU1O75352 247 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 CCNKO75909 580 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 PRSS1P07477 247 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 GNAO1P09471 354 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 GATA2P23769 480 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-220ENST00000544550 HLA-DMAP28067 261 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 PRSS3P35030 304 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 KIAA1644Q3SXP7 199 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 C22orf42Q6IC83 251 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 PRSS48Q7RTY5 328 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 OR10G4Q8NGN3 311 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 ZFAND1Q8TCF1 268 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 DTD1Q8TEA8 209 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 C7orf33Q8WU49 177 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 IL22RA2Q969J5 263 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 SLC25A38Q96DW6 304 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 S100A16Q96FQ6 103 aaKnown RBP2.61□□□□□ -1.99
SNHG1-220ENST00000544550 SPXQ9BT56 116 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 SHANK2-AS3Q9BTD1 123 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 PARD6GQ9BYG4 376 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-220ENST00000544550 SDF2L1Q9HCN8 221 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 ZNF331Q9NQX6 463 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-220ENST00000544550 HIGD1AQ9Y241 93 aa2.61□□□□□ -1.99
SNHG1-220ENST00000544550 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 A0A0G2JRQ6 117 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 IFITM10A6NMD0 228 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 PMS2P5A8MQ11 134 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 TAAR5O14804 337 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 HYPMO75409 117 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 TNFAIP8O95379 198 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 CDS2O95674 445 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 SULT1A3P0DMM9 295 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 SULT1A4P0DMN0 295 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 CT45A10P0DMU9 189 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 KRTAP10-8P60410 259 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 MEF2DQ14814 521 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 SP6Q3SY56 376 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 ZC2HC1AQ96GY0 325 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 C2orf50Q96LR7 162 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 PRADC1Q9BSG0 188 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 VCXQ9H320 206 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 DUSP21Q9H596 190 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 TXNL4BQ9NX01 149 aaKnown RBP2.6□□□□□ -1.99
SNHG1-220ENST00000544550 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 PXMP4Q9Y6I8 212 aa2.6□□□□□ -1.99
SNHG1-220ENST00000544550 IGKV2D-24A0A075B6R9 120 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 IGHV1OR15-1A0A075B7D0 117 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 IGKV1OR2-108A0A075B7D4 117 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 TRAV4A0A0B4J268 109 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 PIGBOS1A0A0B4J2F0 54 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 KLLNB2CW77 178 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 PRSS46E5RG02 174 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 PANO1I0J062 215 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 PITX3O75364 302 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 IL5P05113 134 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 GPX1P07203 203 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 NMBP08949 121 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR10J4P0C629 311 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 SFTA3P0C7M3 94 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 AKR1C4P17516 323 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 CCR6P51684 374 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 PLP1P60201 277 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 SELENOTP62341 195 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 RPL19P84098 196 aaKnown RBP2.59□□□□□ -1.99
SNHG1-220ENST00000544550 AKR1C1Q04828 323 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 RAB31Q13636 194 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 ELOBQ15370 118 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 RHOHQ15669 191 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 UBE2NLQ5JXB2 153 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 ACOT7LQ6ZUV0 252 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 BPIFA4PQ86YQ2 179 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR4C5Q8NGB2 326 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR10P1Q8NGE3 313 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR10G9Q8NGN4 311 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR5H6Q8NGV6 325 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 GPX8Q8TED1 209 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 RASL10AQ92737 203 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 RNF185Q96GF1 192 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 LINC00477Q96M19 166 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 TMEM222Q9H0R3 208 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 GTSF1LQ9H1H1 148 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 OR51M1Q9H341 326 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 URGCP-MRPS24S4R325 110 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 MUC2Q02817 5179 aa2.59□□□□□ -1.99
SNHG1-220ENST00000544550 LINC00854A0A1B0GVQ3 168 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 TRBV6-4A0A1B0GX49 114 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 OR5G3P0C626 314 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 OR4E1P0C645 316 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 LINC00869P0C866 280 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 GATA1P15976 413 aaPredicted RBP2.58□□□□□ -2
SNHG1-220ENST00000544550 TBPP20226 339 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 RNASE4P34096 147 aaKnown RBP2.58□□□□□ -2
SNHG1-220ENST00000544550 SDC2P34741 201 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 POLR2GP62487 172 aaKnown RBP eCLIP2.58□□□□□ -2
SNHG1-220ENST00000544550 Q0VG73 95 aa2.58□□□□□ -2
SNHG1-220ENST00000544550 BTN1A1Q13410 526 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms