RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 C18orf15Q96N68 181 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 ARPC5LQ9BPX5 153 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
CCND1-205ENST00000542367 PKHD1P08F94 4074 aa11.41□□□□□ -0.58
CCND1-205ENST00000542367 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
CCND1-205ENST00000542367 SPINK4O60575 86 aa11.41□□□□□ -0.58
CCND1-205ENST00000542367 ZNF266Q14584 549 aa11.41□□□□□ -0.58
CCND1-205ENST00000542367 Q5BKY6 102 aa11.41□□□□□ -0.58
CCND1-205ENST00000542367 PQLC2Q6ZP29 291 aa11.41□□□□□ -0.58
CCND1-205ENST00000542367 PKD1P98161 4303 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 H3BNG1 76 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 MUC21Q5SSG8 566 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 HSD17B11Q8NBQ5 300 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
CCND1-205ENST00000542367 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
CCND1-205ENST00000542367 ESRGQ1W209 222 aa11.39□□□□□ -0.59
CCND1-205ENST00000542367 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
CCND1-205ENST00000542367 Q9H8V8 135 aa11.39□□□□□ -0.59
CCND1-205ENST00000542367 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
CCND1-205ENST00000542367 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
CCND1-205ENST00000542367 IGHV3-53P01767 116 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 ATP6V0CP27449 155 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
CCND1-205ENST00000542367 ZNF415Q09FC8 603 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 Q6AWC8 147 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 OR2G3Q8NGZ4 309 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 TMED6Q8WW62 240 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 ST6GAL2Q96JF0 529 aa11.38□□□□□ -0.59
CCND1-205ENST00000542367 GIPP09681 153 aaPredicted RBP11.37□□□□□ -0.59
CCND1-205ENST00000542367 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
CCND1-205ENST00000542367 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
CCND1-205ENST00000542367 PSMG3Q9BT73 122 aaPredicted RBP11.37□□□□□ -0.59
CCND1-205ENST00000542367 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
CCND1-205ENST00000542367 MUC4Q99102 2169 aa11.37□□□□□ -0.59
CCND1-205ENST00000542367 A0A096LPF7 62 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 FAM159AQ6UWV7 190 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 ARL6IP6Q8N6S5 226 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 INO80EQ8NBZ0 244 aaPredicted RBP11.36□□□□□ -0.59
CCND1-205ENST00000542367 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
CCND1-205ENST00000542367 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 MBP02144 154 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 GNG5P63218 68 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 SERF2P84101 59 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 TMEM183BQ1AE95 376 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 TMEM183AQ8IXX5 376 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 ASB13Q8WXK3 278 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 UPK3BQ9BT76 320 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 SH3BGRL3Q9H299 93 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 HERC2O95714 4834 aa11.35□□□□□ -0.59
CCND1-205ENST00000542367 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
CCND1-205ENST00000542367 PAX4O43316 350 aa11.34□□□□□ -0.59
CCND1-205ENST00000542367 NAGKQ9UJ70 344 aa11.34□□□□□ -0.59
CCND1-205ENST00000542367 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
CCND1-205ENST00000542367 TRGV11A0A075B6L2 103 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 FXYD6-FXYD2A0A087WZ82 144 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 F6UZH7 168 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 GCHFRP30047 84 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 TNP2Q05952 138 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 FHL2Q14192 279 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 TDRG1Q3Y452 100 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
CCND1-205ENST00000542367 SUN5Q8TC36 379 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 SPXQ9BT56 116 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 PRO0255Q9UI72 69 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
CCND1-205ENST00000542367 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 GNRH2O43555 120 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 CRYBA4P53673 196 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 SLAQ13239 276 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 OR2T35Q8NGX2 323 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
CCND1-205ENST00000542367 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
CCND1-205ENST00000542367 CXorf1O96002 111 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
CCND1-205ENST00000542367 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 C5orf17Q8NAS9 161 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 RASL10AQ92737 203 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 ICOSQ9Y6W8 199 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
CCND1-205ENST00000542367 BORCS7-ASMTA0A0B4J1R7 106 aa11.3□□□□□ -0.6
CCND1-205ENST00000542367 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
CCND1-205ENST00000542367 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
CCND1-205ENST00000542367 TCRAP04437 139 aa11.3□□□□□ -0.6
CCND1-205ENST00000542367 SFTA3P0C7M3 94 aa11.3□□□□□ -0.6
CCND1-205ENST00000542367 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms