RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 PRR9Q5T870 116 aa14.05□□□□□ -0.16
DDB1-220ENST00000542337 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
DDB1-220ENST00000542337 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
DDB1-220ENST00000542337 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
DDB1-220ENST00000542337 DIRC3C9JPN6 131 aa14.04□□□□□ -0.16
DDB1-220ENST00000542337 SLAQ13239 276 aa14.04□□□□□ -0.16
DDB1-220ENST00000542337 PQLC2Q6ZP29 291 aa14.04□□□□□ -0.16
DDB1-220ENST00000542337 UPK3BQ9BT76 320 aa14.04□□□□□ -0.16
DDB1-220ENST00000542337 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
DDB1-220ENST00000542337 PGPA6NDG6 321 aa14.03□□□□□ -0.16
DDB1-220ENST00000542337 ST6GAL2Q96JF0 529 aa14.03□□□□□ -0.16
DDB1-220ENST00000542337 WFDC1Q9HC57 220 aa14.03□□□□□ -0.16
DDB1-220ENST00000542337 MRPS16Q9Y3D3 137 aaKnown RBP14.03□□□□□ -0.16
DDB1-220ENST00000542337 ALG5Q9Y673 324 aa14.03□□□□□ -0.16
DDB1-220ENST00000542337 PKHD1P08F94 4074 aa14.02□□□□□ -0.16
DDB1-220ENST00000542337 PAX4O43316 350 aa14.02□□□□□ -0.17
DDB1-220ENST00000542337 MUC21Q5SSG8 566 aa14.02□□□□□ -0.17
DDB1-220ENST00000542337 FAM159AQ6UWV7 190 aa14.02□□□□□ -0.17
DDB1-220ENST00000542337 TMED6Q8WW62 240 aa14.02□□□□□ -0.17
DDB1-220ENST00000542337 VSIG2Q96IQ7 327 aa14.02□□□□□ -0.17
DDB1-220ENST00000542337 MRPL16Q9NX20 251 aaKnown RBP14.02□□□□□ -0.17
DDB1-220ENST00000542337 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 TNP2Q05952 138 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 Q6ZQT7 251 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 ARL6IP6Q8N6S5 226 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 OR10G4Q8NGN3 311 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 OR10G9Q8NGN4 311 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 OR10G7Q8NGN6 311 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 MED28Q9H204 178 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 PRO0255Q9UI72 69 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 RPH3ALQ9UNE2 315 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 ICOSQ9Y6W8 199 aa14.01□□□□□ -0.17
DDB1-220ENST00000542337 TRGV11A0A075B6L2 103 aa14□□□□□ -0.17
DDB1-220ENST00000542337 A0A096LPF7 62 aa14□□□□□ -0.17
DDB1-220ENST00000542337 A0A1W2PPQ1 181 aa14□□□□□ -0.17
DDB1-220ENST00000542337 Q6AWC8 147 aa14□□□□□ -0.17
DDB1-220ENST00000542337 SPXQ9BT56 116 aa14□□□□□ -0.17
DDB1-220ENST00000542337 HHLA3Q9XRX5 114 aa14□□□□□ -0.17
DDB1-220ENST00000542337 PKD1P98161 4303 aa14□□□□□ -0.17
DDB1-220ENST00000542337 EIF3GO75821 320 aaKnown RBP eCLIP13.99□□□□□ -0.17
DDB1-220ENST00000542337 PTTG1O95997 202 aa13.99□□□□□ -0.17
DDB1-220ENST00000542337 RAB2AP61019 212 aa13.99□□□□□ -0.17
DDB1-220ENST00000542337 KIAA1109Q2LD37 5005 aa13.98□□□□□ -0.17
DDB1-220ENST00000542337 BTF3P20290 206 aaKnown RBP13.98□□□□□ -0.17
DDB1-220ENST00000542337 TMEM183BQ1AE95 376 aa13.98□□□□□ -0.17
DDB1-220ENST00000542337 GOLT1AQ6ZVE7 132 aa13.98□□□□□ -0.17
DDB1-220ENST00000542337 TMEM183AQ8IXX5 376 aa13.98□□□□□ -0.17
DDB1-220ENST00000542337 NAGKQ9UJ70 344 aa13.98□□□□□ -0.17
DDB1-220ENST00000542337 TRGV4A0A0C4DH28 118 aa13.97□□□□□ -0.17
DDB1-220ENST00000542337 C16orf90A8MZG2 172 aa13.97□□□□□ -0.17
DDB1-220ENST00000542337 MBP02144 154 aa13.97□□□□□ -0.17
DDB1-220ENST00000542337 CDC34P49427 236 aaPredicted RBP13.97□□□□□ -0.17
DDB1-220ENST00000542337 ZNF575Q86XF7 245 aa13.97□□□□□ -0.17
DDB1-220ENST00000542337 MDFICQ9P1T7 246 aa13.97□□□□□ -0.17
DDB1-220ENST00000542337 DNAH11Q96DT5 4516 aa13.96□□□□□ -0.17
DDB1-220ENST00000542337 TRAV21A0A0B4J279 112 aa13.96□□□□□ -0.17
DDB1-220ENST00000542337 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.17
DDB1-220ENST00000542337 MRPL23Q16540 153 aaKnown RBP13.96□□□□□ -0.17
DDB1-220ENST00000542337 HSD17B11Q8NBQ5 300 aa13.96□□□□□ -0.17
DDB1-220ENST00000542337 C8orf49Q96NF6 230 aa13.96□□□□□ -0.17
DDB1-220ENST00000542337 CRYBA4P53673 196 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 FHL2Q14192 279 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 OR2G3Q8NGZ4 309 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 AQP10Q96PS8 301 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 NDFIP1Q9BT67 221 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 PSMG3Q9BT73 122 aaPredicted RBP13.95□□□□□ -0.18
DDB1-220ENST00000542337 TREM1Q9NP99 234 aa13.95□□□□□ -0.18
DDB1-220ENST00000542337 DYNC1H1Q14204 4646 aaKnown RBP13.95□□□□□ -0.18
DDB1-220ENST00000542337 SERTM2A0A1B0GWG4 89 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 K7EQM0 130 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 SIVA1O15304 175 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 ARL14EPLP0DKL9 152 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 SERF2P84101 59 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 TDRG1Q3Y452 100 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 INO80EQ8NBZ0 244 aaPredicted RBP13.94□□□□□ -0.18
DDB1-220ENST00000542337 PCNPQ8WW12 178 aaKnown RBP13.94□□□□□ -0.18
DDB1-220ENST00000542337 ASB13Q8WXK3 278 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 RASL10AQ92737 203 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 KRTAP17-1Q9BYP8 105 aa13.94□□□□□ -0.18
DDB1-220ENST00000542337 IQCF2Q8IXL9 164 aa13.93□□□□□ -0.18
DDB1-220ENST00000542337 KCNS1Q96KK3 526 aa13.93□□□□□ -0.18
DDB1-220ENST00000542337 NXPH4O95158 308 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 STAG3L2P0CL84 134 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 ATP6V0CP27449 155 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 RAB24Q969Q5 203 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 KRTAP1-5Q9BYS1 174 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 SDF2L1Q9HCN8 221 aa13.92□□□□□ -0.18
DDB1-220ENST00000542337 MUC4Q99102 2169 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 TRAV8-1A0A0A6YYK1 113 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 F6UZH7 168 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 M0R2P5 195 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 ORM1P02763 201 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 GIPP09681 153 aaPredicted RBP13.91□□□□□ -0.18
DDB1-220ENST00000542337 SRIP30626 198 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 GNG5P63218 68 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 LYPD5Q6UWN5 251 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 C5orf17Q8NAS9 161 aa13.91□□□□□ -0.18
DDB1-220ENST00000542337 OR4C5Q8NGB2 326 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms