RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 THADAQ6YHU6 1953 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 TMSB15BA0A087X1C1 80 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 TRAV3A0A0B4J244 114 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 TEX49A0A1B0GTD5 131 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM202A6NGA9 273 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 M0R1B8 84 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 NDUFB3O43676 98 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 TCRAP04437 139 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 RFPL3SP0C7P2 107 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 MYCNOSP40205 109 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 GTF3C1Q12789 2109 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
SNHG1-219ENST00000542112 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 MIC13Q5XKP0 118 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 IGFL4Q6B9Z1 124 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 SUMO4Q6EEV6 95 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 Q6JHZ5 121 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 Q6ZPA2 131 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 LINC00305Q7Z4B0 112 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF329Q86UD4 541 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 MDP1Q86V88 176 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 C3orf56Q8N813 242 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 PGLYRP4Q96LB8 373 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF714Q96N38 554 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 NABP2Q9BQ15 211 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 RNF7Q9UBF6 113 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 RPUSD1Q9UJJ7 312 aaKnown RBP3.33□□□□□ -1.88
SNHG1-219ENST00000542112 BPTFQ12830 3046 aa3.33□□□□□ -1.88
SNHG1-219ENST00000542112 MKI67P46013 3256 aaKnown RBP3.33□□□□□ -1.88
SNHG1-219ENST00000542112 LRP4O75096 1905 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 KNL1Q8NG31 2342 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 TRBV10-3A0A0K0K1G6 114 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 LILRA5A6NI73 299 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 C5orf67F2Z3F1 127 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 INS-IGF2F8WCM5 200 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 COX7A2P2O60397 106 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 IGHV3-33P01772 117 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 PLA2G5P39877 138 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
SNHG1-219ENST00000542112 ADORA2A-AS1P86434 159 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 FAM27E3Q08E93 113 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 ERCC8Q13216 396 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 SCGB1D4Q6XE38 83 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 MKXQ8IYA7 352 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 SLC25A29Q8N8R3 303 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 TSACCQ96A04 125 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-219ENST00000542112 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 DEPPQ9NTK1 212 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 ARHGAP21Q5T5U3 1957 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 EXPH5Q8NEV8 1989 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 HCFC1P51610 2035 aa3.32□□□□□ -1.88
SNHG1-219ENST00000542112 GON4LQ3T8J9 2241 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 PI4KAP42356 2102 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 TRBV7-1A0A0A6YYK4 115 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 A0A0J9YX75 114 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 LOC101059948A0A1B0GTJ6 334 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF815PA8K554 130 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 D6R8Y8 96 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 NDUFS5O43920 106 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 IGHV3-30P01768 117 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 IGHV3-30-5P0DP03 117 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 LGALS3P17931 250 aaKnown RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 DUTP33316 252 aaKnown RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF138P52744 262 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 IGLV3-21P80748 117 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 ZNF816Q0VGE8 651 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 MIR17HGQ75NE6 70 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 MAPKAPK5-AS1Q8N8E1 139 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 NFAM1Q8NET5 270 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 C10orf105Q8TEF2 133 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 FOXC2Q99958 501 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 EMC6Q9BV81 110 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 C6orf106Q9H6K1 298 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-219ENST00000542112 ARID1AO14497 2285 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 RALGAPA1Q6GYQ0 2036 aa3.31□□□□□ -1.88
SNHG1-219ENST00000542112 TRAV40A0A0B4J280 105 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 IGKV1-8A0A0C4DH67 115 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 IGKV1-6A0A0C4DH72 117 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 A0A0J9YY99 117 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1BA6NDE4 496 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1EA6NEQ0 496 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 USP17L23D6RBM5 183 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 H7C423 109 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 LST1O00453 97 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 SS18L1O75177 396 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 IGKV1D-16P01601 117 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 IGLV2-14P01704 120 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1DP0C7P1 496 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 COX6B1P14854 86 aa3.3□□□□□ -1.88
SNHG1-219ENST00000542112 HOXD3P31249 432 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-219ENST00000542112 CKS2P33552 79 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms