RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RTL8BQ17RB0 113 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 LGALS9BQ3B8N2 356 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 EBLN2Q6P2I7 272 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 IGFL2Q6UWQ7 119 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 LINC00311Q8N616 119 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 NUP210Q8TEM1 1887 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 SRSF12Q8WXF0 261 aaKnown RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 LINC00167Q96N53 147 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 HDHD3Q9BSH5 251 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 ZNF331Q9NQX6 463 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 DAZ1Q9NQZ3 744 aaKnown RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 GNG13Q9P2W3 67 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 KIAA1671Q9BY89 1806 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 NUP214P35658 2090 aaPredicted RBP2.21□□□□□ -2.06
USP28-210ENST00000542033 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
USP28-210ENST00000542033 THSD7BQ9C0I4 1608 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 HEATR5AQ86XA9 2040 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 IGKV6D-21A0A0A0MT36 114 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 TRGV5A0A0B4J1U4 118 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 TRAV2A0A0B4J234 112 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 TRAV17A0A0B4J275 112 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 A0A0J9YW62 118 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 RBAKDNA6NC62 111 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 NCBP2LA6PVI3 153 aaKnown RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 CEBPZOSA8MTT3 80 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 H3BT86 120 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 LEPROTL1O95214 131 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 IGLV1-47P01700 117 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 IGKCP01834 107 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 BGLAPP02818 100 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 CXCL8P10145 99 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 CTLA4P16410 223 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 UBE2E1P51965 193 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 GFERP55789 205 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 NPC2P61916 151 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 RPS11P62280 158 aaKnown RBP eCLIP2.2□□□□□ -2.06
USP28-210ENST00000542033 RPL30P62888 115 aaKnown RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 FKBP1AP62942 108 aaKnown RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 UBE2L3P68036 154 aaKnown RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 DGAT2L6Q6ZPD8 337 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 C6orf201Q7Z4U5 140 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 HMGN2P46Q86SG4 172 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 TRAPPC6BQ86SZ2 158 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 RNF182Q8N6D2 247 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 NPBQ8NG41 125 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 FAM57AQ8TBR7 257 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 NT5CQ8TCD5 201 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 ZNF721Q8TF20 911 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 UBE2E2Q96LR5 201 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 NMNAT3Q96T66 252 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 PRSS27Q9BQR3 290 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 SLC25A2Q9BXI2 301 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 AICDAQ9GZX7 198 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 RPUSD1Q9UJJ7 312 aaKnown RBP2.2□□□□□ -2.06
USP28-210ENST00000542033 ANAPC10Q9UM13 185 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 TIMM9Q9Y5J7 89 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 SCN2AQ99250 2005 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 PLXNA2O75051 1894 aa2.2□□□□□ -2.06
USP28-210ENST00000542033 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DOCK6Q96HP0 2047 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 COL18A1P39060 1754 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 TRAV8-2A0A0B4J237 113 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 TRAV8-4A0A0B4J246 113 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 IGHV1-58A0A0C4DH39 117 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 CPSF4LA6NMK7 179 aaKnown RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 C9JCJ5 164 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 F2Z2F3 143 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 K7EM74 188 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LGALS9O00182 355 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 CD7P09564 240 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 ASAH2BP0C7U1 165 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 FXYD6P3P58550 94 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 HIST1H4AP62805 103 aaKnown RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 CCL8P80075 99 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DAZ2Q13117 558 aaKnown RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 ABCA11PQ4W5N1 156 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 TMEM170BQ5T4T1 132 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LGALS9CQ6DKI2 356 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 SCGB1D4Q6XE38 83 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 ZNF493Q6ZR52 646 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LINC00173Q6ZV60 143 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DAZ4Q86SG3 579 aaKnown RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 C20orf203Q8NBC4 194 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LRRC29Q8WV35 223 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 TMEM158Q8WZ71 300 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 FAM19A4Q96LR4 140 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 GPX7Q96SL4 187 aaPredicted RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 TRGV9Q99603 122 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 PLA2G12AQ9BZM1 189 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 LINC00597Q9H2U6 94 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DPH3P1Q9H4G8 78 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 C16orf95Q9H693 158 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 ZNF286AQ9HBT8 521 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DAZ3Q9NR90 486 aaKnown RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 OTORQ9NRC9 128 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 AMMECR1Q9Y4X0 333 aaPredicted RBP2.19□□□□□ -2.06
USP28-210ENST00000542033 LTBP4Q8N2S1 1624 aa2.19□□□□□ -2.06
USP28-210ENST00000542033 DOCK4Q8N1I0 1966 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 266.1 ms