RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CNTFRP26992 372 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BBP33778 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 SNCAP37840 140 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 MARCKSL1P49006 195 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 POLR2HP52434 150 aaKnown RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 TCL1AP56279 114 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BDP58876 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 TAS2R20P59543 309 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BCP62807 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 BTG2P78543 158 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 DHRS2Q13268 280 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR8B8Q15620 311 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST2H2BEQ16778 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 ZNF660Q6AZW8 331 aaPredicted RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 SLC25A26Q70HW3 274 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 MARCH3Q86UD3 253 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 CALHM3Q86XJ0 350 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 ZNF709Q8N972 641 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 C5orf17Q8NAS9 161 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR5A1Q8NGJ0 315 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR2T35Q8NGX2 323 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR51H1Q8NH63 302 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 OR10D3Q8NH80 312 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BHQ93079 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 CIB3Q96Q77 187 aaPredicted RBP2.53□□□□□ -2
SNHG1-217ENST00000541578 TSPAN32Q96QS1 320 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 GPER1Q99527 375 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BNQ99877 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HIST1H2BMQ99879 126 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 LPAR5Q9H1C0 372 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 BANF2Q9H503 90 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 DUSP21Q9H596 190 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 VSIRQ9H7M9 311 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 GPR84Q9NQS5 396 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 LAMTOR2Q9Y2Q5 125 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 FIS1Q9Y3D6 152 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 HDGFL3Q9Y3E1 203 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
SNHG1-217ENST00000541578 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 C5orf49A4QMS7 147 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 A6NED7 52 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 FABP5P3A8MUU1 101 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 DEFB108AA8MXU0 73 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 H7BYZ3 331 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 J3KT08 172 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 M0R2Z0 102 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 CTSDP07339 412 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF32P17041 273 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 CXCL2P19875 107 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 NFYBP25208 207 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 CD34P28906 385 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 RPL12P30050 165 aaKnown RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 PPP1CCP36873 323 aaKnown RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 PSMB3P49720 205 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 HIST1H3AP68431 136 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 H3F3AP84243 136 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 MEF2BQ02080 365 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 MMDQ15546 238 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 BATFQ16520 125 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 LRRC75BQ2VPJ9 315 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 GLT8D1Q68CQ7 371 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 OR2T2Q6IF00 324 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 EBLN2Q6P2I7 272 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 FOXI2Q6ZQN5 318 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 VN1R4Q7Z5H5 301 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 HMGN2P46Q86SG4 172 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 OSR2Q8N2R0 312 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 KRTCAP2Q8N6L1 136 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 OR4B1Q8NGF8 309 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 OR4X1Q8NH49 305 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 OR4A5Q8NH83 315 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 KLF14Q8TD94 323 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 ACY3Q96HD9 319 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 CCDC115Q96NT0 180 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 C20orf27Q9GZN8 174 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 GTSF1LQ9H1H1 148 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 PRTFDC1Q9NRG1 225 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 UQCR10Q9UDW1 63 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 POLR1DQ9Y2S0 133 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 LSM5Q9Y4Y9 91 aaKnown RBP2.52□□□□□ -2.01
SNHG1-217ENST00000541578 ICOSQ9Y6W8 199 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 TENM1Q9UKZ4 2725 aa2.52□□□□□ -2.01
SNHG1-217ENST00000541578 A0A087WWC5 75 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 TRAV8-1A0A0A6YYK1 113 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 C7orf77A4D0Y5 90 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 AKAIN1P0CW23 69 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 HIST1H1DP16402 221 aaKnown RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 SDC2P34741 201 aa2.51□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF140P52738 457 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 LSM3P62310 102 aaKnown RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 RPS25P62851 125 aaKnown RBP2.51□□□□□ -2.01
SNHG1-217ENST00000541578 PSG4Q00888 419 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms