RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 OR10J3Q5JRS4 329 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 CYP2G1PQ6ZSU1 146 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 SNX29P2Q8IUI4 249 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 ATP6V0E2Q8NHE4 81 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 MARCH1Q8TCQ1 289 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 BAALCQ8WXS3 180 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 RASL10AQ92737 203 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 LINC01600Q96MT4 127 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 RTBDNQ9BSG5 229 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-214ENST00000540865 DPH3P1Q9H4G8 78 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 C14orf166Q9Y224 244 aaKnown RBP2.96□□□□□ -1.94
SNHG1-214ENST00000540865 PXMP4Q9Y6I8 212 aa2.96□□□□□ -1.94
SNHG1-214ENST00000540865 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 TRAV8-1A0A0A6YYK1 113 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 TRAV4A0A0B4J268 109 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 A0A0B4J2A0 478 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 A0A0D9SG52 128 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 LOC100506127A0A0U1RQW1 187 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 PRSS46E5RG02 174 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 CCNKO75909 580 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 NMBP08949 121 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 OR5G3P0C626 314 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 SFTA3P0C7M3 94 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 CRISP2P16562 243 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 RNASE4P34096 147 aaKnown RBP2.95□□□□□ -1.94
SNHG1-214ENST00000540865 AQP4P55087 323 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 GABARAPL2P60520 117 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 AKR1C1Q04828 323 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 CD300CQ08708 224 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 BTN1A1Q13410 526 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 OPCMLQ14982 345 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 SURF2Q15527 256 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-214ENST00000540865 FFAR4Q5NUL3 377 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 NHLRC2Q8NBF2 726 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 OR10P1Q8NGE3 313 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 RMI2Q96E14 147 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 FAM19A4Q96LR4 140 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 LINC00477Q96M19 166 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 SHPKQ9UHJ6 478 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 PAIP2BQ9ULR5 123 aaKnown RBP2.95□□□□□ -1.94
SNHG1-214ENST00000540865 TP53TG3Q9ULZ0 132 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 RPH3ALQ9UNE2 315 aa2.95□□□□□ -1.94
SNHG1-214ENST00000540865 LOC100131303A0A0U1RQF7 123 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 FABP12A6NFH5 140 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 GGTLC3B5MD39 225 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 K7EPK0 472 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SLC17A3O00476 420 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 PITX3O75364 302 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 MED6O75586 246 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 APOA1P02647 267 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 GPX1P07203 203 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 OR4E1P0C645 316 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 LINC00869P0C866 280 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 IAPPP10997 89 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 CAMPP49913 170 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SEC61BP60468 96 aaKnown RBP2.94□□□□□ -1.94
SNHG1-214ENST00000540865 GAGE1Q13065 139 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 GAGE4Q13068 117 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 GUK1Q16774 197 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SCGB2B2Q4G0G5 96 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 C14orf177Q52M58 125 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 FAM122CQ6P4D5 195 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 PATE2Q6UY27 113 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 LYZL2Q7Z4W2 148 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 BPIFA4PQ86YQ2 179 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 TMEM229BQ8NBD8 167 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 OR4C5Q8NGB2 326 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 OR51S1Q8NGJ8 323 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 MRPL53Q96EL3 112 aaKnown RBP2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SAT2Q96F10 170 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-214ENST00000540865 CIB3Q96Q77 187 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SPXQ9BT56 116 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 ARV1Q9H2C2 271 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 KCNIP3Q9Y2W7 256 aa2.94□□□□□ -1.94
SNHG1-214ENST00000540865 PIGBOS1A0A0B4J2F0 54 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 A0A0J9YXV3 536 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 IFITM10A6NMD0 228 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 H3BQ15 152 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 H3BTX0 84 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 ZNF253O75346 499 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 RAB3DO95716 219 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 SNRPCP09234 159 aaKnown RBP2.93□□□□□ -1.94
SNHG1-214ENST00000540865 SEC11BP0C7V7 166 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 IGLC2P0DOY2 106 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 GATA1P15976 413 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-214ENST00000540865 TAS2R19P59542 299 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 KRTAP10-8P60410 259 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 POLR2GP62487 172 aaKnown RBP eCLIP2.93□□□□□ -1.94
SNHG1-214ENST00000540865 SRPXP78539 464 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 ERCC8Q13216 396 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 LINC00305Q7Z4B0 112 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 OR4D10Q8NGI6 311 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 OR52I2Q8NH67 350 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 ARL6Q9H0F7 186 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 AGPAT4-IT1Q9H0P7 198 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 GTSF1LQ9H1H1 148 aa2.93□□□□□ -1.94
SNHG1-214ENST00000540865 MTFP1Q9UDX5 166 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms