RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C6orf223Q8N319 242 aa14.55□□□□□ -0.08
CHFR-217ENST00000540537 ARPC5LQ9BPX5 153 aa14.55□□□□□ -0.08
CHFR-217ENST00000540537 TP53TG3Q9ULZ0 132 aa14.55□□□□□ -0.08
CHFR-217ENST00000540537 LENEPQ9Y5L5 61 aa14.55□□□□□ -0.08
CHFR-217ENST00000540537 DIRC3C9JPN6 131 aa14.54□□□□□ -0.08
CHFR-217ENST00000540537 PTTG1O95997 202 aa14.54□□□□□ -0.08
CHFR-217ENST00000540537 PQLC2Q6ZP29 291 aa14.54□□□□□ -0.08
CHFR-217ENST00000540537 UPK3BQ9BT76 320 aa14.54□□□□□ -0.08
CHFR-217ENST00000540537 OTORQ9NRC9 128 aa14.54□□□□□ -0.08
CHFR-217ENST00000540537 TMED6Q8WW62 240 aa14.53□□□□□ -0.08
CHFR-217ENST00000540537 VSIG2Q96IQ7 327 aa14.53□□□□□ -0.08
CHFR-217ENST00000540537 Q9H8V8 135 aa14.53□□□□□ -0.08
CHFR-217ENST00000540537 A0A1W2PPV4 95 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 EIF3GO75821 320 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHFR-217ENST00000540537 MED14OSP0DP75 135 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 RAB2AP61019 212 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 ZNF415Q09FC8 603 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 ESRGQ1W209 222 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 FAM74A1Q5RGS3 127 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 Q6AWC8 147 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 ST6GAL2Q96JF0 529 aa14.52□□□□□ -0.09
CHFR-217ENST00000540537 MRPS16Q9Y3D3 137 aaKnown RBP14.52□□□□□ -0.09
CHFR-217ENST00000540537 TTC32Q5I0X7 151 aa14.51□□□□□ -0.09
CHFR-217ENST00000540537 ARL6IP6Q8N6S5 226 aa14.51□□□□□ -0.09
CHFR-217ENST00000540537 CMTM2Q8TAZ6 248 aa14.51□□□□□ -0.09
CHFR-217ENST00000540537 HYLS1Q96M11 299 aa14.51□□□□□ -0.09
CHFR-217ENST00000540537 A0A096LPF7 62 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 PGPA6NDG6 321 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 OR10G4Q8NGN3 311 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 OR10G9Q8NGN4 311 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 OR10G7Q8NGN6 311 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 MED28Q9H204 178 aa14.5□□□□□ -0.09
CHFR-217ENST00000540537 MRPL16Q9NX20 251 aaKnown RBP14.5□□□□□ -0.09
CHFR-217ENST00000540537 TNP2Q05952 138 aa14.49□□□□□ -0.09
CHFR-217ENST00000540537 MUC21Q5SSG8 566 aa14.49□□□□□ -0.09
CHFR-217ENST00000540537 OR2G3Q8NGZ4 309 aa14.49□□□□□ -0.09
CHFR-217ENST00000540537 AQP10Q96PS8 301 aa14.49□□□□□ -0.09
CHFR-217ENST00000540537 SLAQ13239 276 aa14.48□□□□□ -0.09
CHFR-217ENST00000540537 RPH3ALQ9UNE2 315 aa14.48□□□□□ -0.09
CHFR-217ENST00000540537 TRGV11A0A075B6L2 103 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 A0A1W2PPQ1 181 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 CDC34P49427 236 aaPredicted RBP14.47□□□□□ -0.09
CHFR-217ENST00000540537 FAM159AQ6UWV7 190 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 GOLT1AQ6ZVE7 132 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 HSD17B11Q8NBQ5 300 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 PSMG3Q9BT73 122 aaPredicted RBP14.47□□□□□ -0.09
CHFR-217ENST00000540537 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 RYR1P21817 5038 aa14.47□□□□□ -0.09
CHFR-217ENST00000540537 PAX4O43316 350 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 IGHV3-53P01767 116 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 ASB13Q8WXK3 278 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 SPXQ9BT56 116 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 KRTAP1-5Q9BYS1 174 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 ICOSQ9Y6W8 199 aa14.46□□□□□ -0.09
CHFR-217ENST00000540537 PCLOQ9Y6V0 5065 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 HMGB3O15347 200 aaKnown RBP14.45□□□□□ -0.1
CHFR-217ENST00000540537 STAG3L2P0CL84 134 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 STAG3L3P0CL85 134 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 ARL14EPLP0DKL9 152 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 TMEM183BQ1AE95 376 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 TDRG1Q3Y452 100 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 ZNF575Q86XF7 245 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 TMEM183AQ8IXX5 376 aa14.45□□□□□ -0.1
CHFR-217ENST00000540537 GIPP09681 153 aaPredicted RBP14.44□□□□□ -0.1
CHFR-217ENST00000540537 BTF3P20290 206 aaKnown RBP14.44□□□□□ -0.1
CHFR-217ENST00000540537 ATP6V0CP27449 155 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 CRYBA4P53673 196 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 FHL2Q14192 279 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 RASL10AQ92737 203 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 KRTAP17-1Q9BYP8 105 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 HHLA3Q9XRX5 114 aa14.44□□□□□ -0.1
CHFR-217ENST00000540537 TRAV21A0A0B4J279 112 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 SERTM2A0A1B0GWG4 89 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 MBP02144 154 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 GNG5P63218 68 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 SERF2P84101 59 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 SUN5Q8TC36 379 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 RAB24Q969Q5 203 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 NAGKQ9UJ70 344 aa14.43□□□□□ -0.1
CHFR-217ENST00000540537 TRAV8-1A0A0A6YYK1 113 aa14.42□□□□□ -0.1
CHFR-217ENST00000540537 TVP23CQ96ET8 276 aa14.42□□□□□ -0.1
CHFR-217ENST00000540537 C8orf49Q96NF6 230 aa14.42□□□□□ -0.1
CHFR-217ENST00000540537 TREM1Q9NP99 234 aa14.42□□□□□ -0.1
CHFR-217ENST00000540537 GCHFRP30047 84 aa14.41□□□□□ -0.1
CHFR-217ENST00000540537 MRPL23Q16540 153 aaKnown RBP14.41□□□□□ -0.1
CHFR-217ENST00000540537 Q5BKY6 102 aa14.41□□□□□ -0.1
CHFR-217ENST00000540537 IQCF2Q8IXL9 164 aa14.41□□□□□ -0.1
CHFR-217ENST00000540537 C5orf17Q8NAS9 161 aa14.41□□□□□ -0.1
CHFR-217ENST00000540537 TRGV4A0A0C4DH28 118 aa14.4□□□□□ -0.1
CHFR-217ENST00000540537 F6UZH7 168 aa14.4□□□□□ -0.1
CHFR-217ENST00000540537 INO80EQ8NBZ0 244 aaPredicted RBP14.4□□□□□ -0.1
CHFR-217ENST00000540537 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
CHFR-217ENST00000540537 IGHV3-16A0A0C4DH30 117 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 SIVA1O15304 175 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 SFTA3P0C7M3 94 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 ZNF479Q96JC4 524 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 NDFIP1Q9BT67 221 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 SH3BGRL3Q9H299 93 aa14.39□□□□□ -0.11
CHFR-217ENST00000540537 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms