RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ZNF705DP0CH99 300 aaPredicted RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 ZNF705BP0CI00 300 aaPredicted RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 TPT1P13693 172 aaKnown RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 C4BPBP20851 252 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 CSN1S1P47710 185 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 RANP62826 216 aaKnown RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 UBE2L3P68036 154 aaKnown RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 HIST1H1AQ02539 215 aaPredicted RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 FAM74A1Q5RGS3 127 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 AKR1C8PQ5T2L2 129 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 EIF5AL1Q6IS14 154 aaKnown RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 EXOC3-AS1Q8N2X6 119 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 OR11H2Q8NH07 326 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 STOML3Q8TAV4 291 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 TMEM18Q96B42 140 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 LINC00477Q96M19 166 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 RARRES2Q99969 163 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 ZNF471Q9BX82 626 aaPredicted RBP4.3□□□□□ -1.72
DDB1-210ENST00000538129 OTORQ9NRC9 128 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 TMEM167BQ9NRX6 74 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 XCL2Q9UBD3 114 aa4.3□□□□□ -1.72
DDB1-210ENST00000538129 CTXND1A0A1B0GTU2 59 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 RBAKDNA6NC62 111 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 PGPA6NDG6 321 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 BOLA2-SMG1P6H3BVE0 249 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 M0R3E3 92 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
DDB1-210ENST00000538129 SLC25A5P05141 298 aaKnown RBP4.29□□□□□ -1.72
DDB1-210ENST00000538129 NMBP08949 121 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 ARL14EPLP0DKL9 152 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 MIFP14174 115 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 GCHFRP30047 84 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 TSPOP30536 169 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 ZFP69Q49AA0 526 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 DPPA3Q6W0C5 159 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 ZNF705AQ6ZN79 300 aaPredicted RBP4.29□□□□□ -1.72
DDB1-210ENST00000538129 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 SLC51BQ86UW2 128 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 MBD3L1Q8WWY6 194 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 PHYHIPLQ96FC7 376 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 IGF2BP2-AS1Q96M15 143 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 ODF3Q96PU9 254 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 AGPAT4-IT1Q9H0P7 198 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 SLC35B3Q9H1N7 401 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 Q9H3A6 140 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
DDB1-210ENST00000538129 TRBV7-9A0A0J9YWB2 115 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 A0A1W2PPQ1 181 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 A0A1W2PRE2 83 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 CRXO43186 299 aaPredicted RBP4.28□□□□□ -1.72
DDB1-210ENST00000538129 EIF3GO75821 320 aaKnown RBP eCLIP4.28□□□□□ -1.72
DDB1-210ENST00000538129 CT45A10P0DMU9 189 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 LEPP41159 167 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 CDKN1BP46527 198 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 RAB5CP51148 216 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 FXYD7P58549 80 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 CD300CQ08708 224 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 ZNF726P1Q15940 193 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 SPINK13Q1W4C9 94 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 C1orf158Q8N1D5 194 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 C9orf62Q8N4C0 152 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 TMED6Q8WW62 240 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 FAM19A4Q96LR4 140 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 C20orf144Q9BQM9 153 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 NKX6-2Q9C056 277 aaPredicted RBP4.28□□□□□ -1.72
DDB1-210ENST00000538129 ZNF492Q9P255 531 aa4.28□□□□□ -1.72
DDB1-210ENST00000538129 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 A0A0J9YWU9 116 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 MAP1LC3B2A6NCE7 125 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 C3orf84H3BNL1 204 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 M0R2Z0 102 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 INSP01308 110 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 CRISP2P16562 243 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 ZNF138P52744 262 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 ERCC8Q13216 396 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 PIK3CD-AS1Q5SR53 167 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 TMEM78Q5T7P6 136 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 SSX7Q7RTT5 188 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 TMEM256Q8N2U0 113 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 Q8NAQ8 132 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 MUC7Q8TAX7 377 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 SFT2D1Q8WV19 159 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 VGLL1Q99990 258 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 TMEM208Q9BTX3 173 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 MAP1LC3BQ9GZQ8 125 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 C11orf68Q9H3H3 251 aaKnown RBP4.27□□□□□ -1.73
DDB1-210ENST00000538129 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 LENEPQ9Y5L5 61 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
DDB1-210ENST00000538129 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 IGKV2-40A0A087WW87 121 aaPredicted RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 TRAV1-1A0A0B4J248 108 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 IGHV4-28A0A0C4DH34 117 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 TMEM189A5PLL7 270 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 FBLL1A6NHQ2 334 aaKnown RBP4.26□□□□□ -1.73
DDB1-210ENST00000538129 KLLNB2CW77 178 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 TEX46H3BTG2 121 aa4.26□□□□□ -1.73
DDB1-210ENST00000538129 H7BYZ3 331 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms