RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 Q8TAT8 98 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 PPP1R1CQ8WVI7 109 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 ATP5SQ99766 215 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
CPSF1-207ENST00000531727 PAX4O43316 350 aa11.56□□□□□ -0.56
CPSF1-207ENST00000531727 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
CPSF1-207ENST00000531727 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
CPSF1-207ENST00000531727 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
CPSF1-207ENST00000531727 PRO0255Q9UI72 69 aa11.56□□□□□ -0.56
CPSF1-207ENST00000531727 A6NHS1 94 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 UBE2L3P68036 154 aaKnown RBP11.55□□□□□ -0.56
CPSF1-207ENST00000531727 SLAQ13239 276 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 ZNF266Q14584 549 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 FFAR4Q5NUL3 377 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 MARVELD1Q9BSK0 173 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 HSPB11Q9Y547 144 aa11.55□□□□□ -0.56
CPSF1-207ENST00000531727 SIVA1O15304 175 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 MPC2O95563 127 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 PET100P0DJ07 73 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 CRYBA4P53673 196 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 LINC00315P59091 139 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 FHL2Q14192 279 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 MAPKAPK5-AS1Q8N8E1 139 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 HHLA3Q9XRX5 114 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 LENEPQ9Y5L5 61 aa11.54□□□□□ -0.56
CPSF1-207ENST00000531727 NXPH4O95158 308 aa11.53□□□□□ -0.56
CPSF1-207ENST00000531727 TAS2R45P59539 299 aa11.53□□□□□ -0.56
CPSF1-207ENST00000531727 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
CPSF1-207ENST00000531727 MUC21Q5SSG8 566 aa11.53□□□□□ -0.56
CPSF1-207ENST00000531727 DIRC3C9JPN6 131 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 IFNA5P01569 189 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
CPSF1-207ENST00000531727 Q6AWC8 147 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 Q6ZRN7 208 aaPredicted RBP11.52□□□□□ -0.57
CPSF1-207ENST00000531727 SCGB1C1Q8TD33 95 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 C8orf49Q96NF6 230 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
CPSF1-207ENST00000531727 SSNA1O43805 119 aa11.51□□□□□ -0.57
CPSF1-207ENST00000531727 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
CPSF1-207ENST00000531727 SMIM3Q9BZL3 60 aa11.51□□□□□ -0.57
CPSF1-207ENST00000531727 PTTG2Q9NZH5 202 aa11.51□□□□□ -0.57
CPSF1-207ENST00000531727 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 IQCF2Q8IXL9 164 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 OR10G4Q8NGN3 311 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 TMED6Q8WW62 240 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 SPXQ9BT56 116 aa11.5□□□□□ -0.57
CPSF1-207ENST00000531727 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
CPSF1-207ENST00000531727 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 RASL10AQ92737 203 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 OTORQ9NRC9 128 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 MBD2Q9UBB5 411 aa11.49□□□□□ -0.57
CPSF1-207ENST00000531727 PGPA6NDG6 321 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 EIF3GO75821 320 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPSF1-207ENST00000531727 SFTA3P0C7M3 94 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 DEFA1P59665 94 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 DEFA3P59666 94 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 FAM74A1Q5RGS3 127 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 Q8N1X5 172 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 WFDC1Q9HC57 220 aa11.48□□□□□ -0.57
CPSF1-207ENST00000531727 K7EQD1 137 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
CPSF1-207ENST00000531727 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 PQLC2Q6ZP29 291 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
CPSF1-207ENST00000531727 SRIP30626 198 aa11.46□□□□□ -0.57
CPSF1-207ENST00000531727 GOLT1AQ6ZVE7 132 aa11.46□□□□□ -0.57
CPSF1-207ENST00000531727 PCNPQ8WW12 178 aaKnown RBP11.46□□□□□ -0.57
CPSF1-207ENST00000531727 NAGKQ9UJ70 344 aa11.46□□□□□ -0.57
CPSF1-207ENST00000531727 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 TRAV4A0A0B4J268 109 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 ORM1P02763 201 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 GYPEP15421 78 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 RAB2AP61019 212 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 LY96Q9Y6Y9 160 aa11.45□□□□□ -0.58
CPSF1-207ENST00000531727 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 M0R2P5 195 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 EREGO14944 169 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 GNRH2O43555 120 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 PGPEP1Q9NXJ5 209 aa11.44□□□□□ -0.58
CPSF1-207ENST00000531727 TRAV8-1A0A0A6YYK1 113 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 C9JCJ5 164 aa11.43□□□□□ -0.58
CPSF1-207ENST00000531727 F6UZH7 168 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms