RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SLC38A11Q08AI6 406 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 LAGE3Q14657 143 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 SAT2Q96F10 170 aaPredicted RBP5.25□□□□□ -1.57
USP48-212ENST00000527823 TXNDC17Q9BRA2 123 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
USP48-212ENST00000527823 DISC1C4P0D8 188 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 C9JCJ5 164 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 K7EPK0 472 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 WRBO00258 174 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 NDUFB4O95168 129 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGLV2-11P01706 119 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGHV3-30P01768 117 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGHV3-33P01772 117 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ORM1P02763 201 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 PRSS2P07478 247 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGHV3-30-3P0DP02 117 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGHV3-30-5P0DP03 117 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 CRISP2P16562 243 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ANXA7P20073 488 aaKnown RBP5.24□□□□□ -1.57
USP48-212ENST00000527823 PPT1P50897 306 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 SRPXP78539 464 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ERCC8Q13216 396 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ASAH1Q13510 395 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ZNF846Q147U1 533 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 OPCMLQ14982 345 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 SPANXN5Q5MJ07 72 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 LINC00305Q7Z4B0 112 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IQCF2Q8IXL9 164 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 ZFAND2AQ8N6M9 145 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 OR10P1Q8NGE3 313 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 OR10G4Q8NGN3 311 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 CIB3Q96Q77 187 aaPredicted RBP5.24□□□□□ -1.57
USP48-212ENST00000527823 DNAJC4Q9NNZ3 241 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 PXMP4Q9Y6I8 212 aa5.24□□□□□ -1.57
USP48-212ENST00000527823 IGHV1OR15-1A0A075B7D0 117 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 DUXBA0A1W2PPF3 345 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 USP17L23D6RBM5 183 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 SYNGR2O43760 224 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 MPDU1O75352 247 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 VBP1P61758 197 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 SELENOTP62341 195 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 BPIFA4PQ86YQ2 179 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 SMIM4Q8WVI0 70 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 TMED6Q8WW62 240 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 PRRT1Q99946 306 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 SLC25A31Q9H0C2 315 aa5.23□□□□□ -1.57
USP48-212ENST00000527823 MED6O75586 246 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 AKAIN1P0CW23 69 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 SLC25A6P12236 298 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 RNASE4P34096 147 aaKnown RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 RRAS2P62070 204 aaPredicted RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 SSBP1Q04837 148 aaKnown RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 CLVS1Q8IUQ0 354 aaPredicted RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 NHLRC2Q8NBF2 726 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 TMEM37Q8WXS4 190 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 MRPL53Q96EL3 112 aaKnown RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 KCNIP3Q9Y2W7 256 aa5.22□□□□□ -1.57
USP48-212ENST00000527823 STRAPQ9Y3F4 350 aaKnown RBP5.22□□□□□ -1.57
USP48-212ENST00000527823 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 IGKV2-40A0A087WW87 121 aaPredicted RBP5.21□□□□□ -1.58
USP48-212ENST00000527823 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 hDV102S1A0JD36 115 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 COX7A2P2O60397 106 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 IGKV2D-40P01614 121 aaPredicted RBP5.21□□□□□ -1.58
USP48-212ENST00000527823 ANXA3P12429 323 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 ACOT6Q3I5F7 207 aaPredicted RBP5.21□□□□□ -1.58
USP48-212ENST00000527823 OR10J3Q5JRS4 329 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 S100A7AQ86SG5 101 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 ZNF546Q86UE3 836 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 BAALCQ8WXS3 180 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 RASL10AQ92737 203 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 AGPAT4-IT1Q9H0P7 198 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 MIXL1Q9H2W2 232 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 RABL2BQ9UNT1 228 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 RNF24Q9Y225 148 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 MUC2Q02817 5179 aa5.21□□□□□ -1.58
USP48-212ENST00000527823 TRAV8-6A0A0B4J262 113 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 RBFOX3A6NFN3 312 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 AGPAT2O15120 278 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 ZNF253O75346 499 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 GAS8-AS1O95177 125 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 GPX1P07203 203 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 GATA1P15976 413 aaPredicted RBP5.2□□□□□ -1.58
USP48-212ENST00000527823 POLR2GP62487 172 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP48-212ENST00000527823 TDRG1Q3Y452 100 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 MUC21Q5SSG8 566 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 LELP1Q5T871 98 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 Q8TAT8 98 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 MGST2Q99735 147 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 FUNDC2Q9BWH2 189 aa5.2□□□□□ -1.58
USP48-212ENST00000527823 TRBV19A0A075B6N1 114 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 IGHV3-16A0A0C4DH30 117 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 ANKRD20A5PA0PJZ0 165 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 FNDC10F2Z333 226 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 SSSCA1O60232 199 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 NMBP08949 121 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 METTL15P1P0C7V9 234 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 MRPS10P82664 201 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms