RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	TEX29	Q8N6K0	151 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	ARL6IP6	Q8N6S5	226 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	OR1N2	Q8NGR9	330 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	OR10AG1	Q8NH19	301 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	SRSF12	Q8WXF0	261 aa	Known RBP	6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	TIMD4	Q96H15	378 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF48	Q96MX3	618 aa	Predicted RBP	6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	RNF24	Q9Y225	148 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	PKD1L1	Q8TDX9	2849 aa		6.08	□□□□□ -1.44
SPIDR-223	ENST00000524033	IGHV3-21	A0A0B4J1V1	117 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	SERTM2	A0A1B0GWG4	89 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	TOX4	O94842	621 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	HTR1D	P28221	377 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	CEACAM3	P40198	252 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF138	P52744	262 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	PDE6H	Q13956	83 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	VAMP3	Q15836	100 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	PPP1R27	Q86WC6	154 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	PIFO	Q8TCI5	191 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF418	Q8TF45	676 aa	Predicted RBP	6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF414	Q96IQ9	312 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	CST9L	Q9H4G1	147 aa		6.07	□□□□□ -1.44
SPIDR-223	ENST00000524033	CR1	P17927	2039 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033		A0A087X0K7	114 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	BUB1B-PAK6	H3BSN5	160 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	ENSA	O43768	121 aa	Known RBP	6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	NDUFA3	O95167	84 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	CSN1S1	P47710	185 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	OCIAD2	Q56VL3	154 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	FAM104B	Q5XKR9	115 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	FA2H	Q7L5A8	372 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	BPIFA4P	Q86YQ2	179 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	BOD1L2	Q8IYS8	172 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF491	Q8N8L2	437 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	C17orf77	Q96MU5	243 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	RASL11B	Q9BPW5	248 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	MCRIP2	Q9BUT9	160 aa	Known RBP	6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	FBXL15	Q9H469	300 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	SIGLEC8	Q9NYZ4	499 aa		6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	PEF1	Q9UBV8	284 aa	Known RBP	6.06	□□□□□ -1.44
SPIDR-223	ENST00000524033	CBY3	A6NI87	242 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033		H3BRM9	83 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033		J3QLI3	93 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	SIVA1	O15304	175 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	IGLC6	P0CF74	106 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	FAM106CP	P0CH98	169 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	GATA3	P23771	443 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	HSD52	Q0P140	79 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	FAM106A	Q4KMX7	169 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	TMEM97	Q5BJF2	176 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	AMMECR1L	Q6DCA0	310 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	OR9G4	Q8NGQ1	327 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	CFHR4	Q92496	578 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	C8orf49	Q96NF6	230 aa		6.05	□□□□□ -1.44
SPIDR-223	ENST00000524033	IGLV11-55	A0A075B6I3	123 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	TMEM213	A2RRL7	107 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	FBLL1	A6NHQ2	334 aa	Known RBP	6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	C9orf118	A6NHY6	69 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033		K7EQM0	130 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	SH2D1A	O60880	128 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	CSN3	P07498	182 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	HILS1	P60008	231 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	COTL1	Q14019	142 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	MRPL51	Q4U2R6	128 aa	Known RBP	6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	LDLRAD2	Q5SZI1	272 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	XP32	Q5T750	250 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	ADAMTSL5	Q6ZMM2	481 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	ERAS	Q7Z444	233 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZNF575	Q86XF7	245 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	C3orf56	Q8N813	242 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	LINC00482	Q8N8I6	264 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	LY6G5B	Q8NDX9	201 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	NPB	Q8NG41	125 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	RNF125	Q96EQ8	232 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	RAX2	Q96IS3	184 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	CNFN	Q9BYD5	112 aa		6.04	□□□□□ -1.44
SPIDR-223	ENST00000524033	LOC100996750	A0A140TA64	210 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	NPIPB5	A8MRT5	1133 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033		D6R8Y8	96 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033		M0R3E3	92 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	HBD	P02042	147 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	PLA2G1B	P04054	148 aa	Known RBP	6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	APELA	P0DMC3	54 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	CT45A10	P0DMU9	189 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	MED14OS	P0DP75	135 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	ZFP36	P26651	326 aa	Known RBP	6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	IFI27	P40305	119 aa	Predicted RBP	6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	DLX1	P56177	255 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	KLK9	Q2XQG4	91 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	LYZL1	Q6UWQ5	148 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	ORMDL3	Q8N138	153 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	OR4X2	Q8NGF9	303 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	PRSS3P2	Q8NHM4	247 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	RNF185	Q96GF1	192 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	PRELID3A	Q96N28	172 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	KRTAP4-6	Q9BYQ5	205 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	RABAC1	Q9UI14	185 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	KLK9	Q9UKQ9	250 aa		6.03	□□□□□ -1.44
SPIDR-223	ENST00000524033	INSIG2	Q9Y5U4	225 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms