RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TMEM183AQ8IXX5 376 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
SDCBP-212ENST00000523483 H3BMM0 161 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 DUSP14O95147 198 aaKnown RBP6.92□□□□□ -1.3
SDCBP-212ENST00000523483 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 MT-ND4LP03901 98 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
SDCBP-212ENST00000523483 GZMBP10144 247 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-212ENST00000523483 PNRC1Q12796 327 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-212ENST00000523483 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 CBLN2Q8IUK8 224 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 MUC21A0A0G2JKD1 596 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 MUC21A0A140T8X8 626 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 PRR9Q5T870 116 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 OR2D3Q8NGH3 330 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 OR10G8Q8NGN5 311 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
SDCBP-212ENST00000523483 GRIFINA4D1Z8 144 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 OR2K2Q8NGT1 345 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 GATCO43716 136 aaKnown RBP6.91□□□□□ -1.3
SDCBP-212ENST00000523483 SH2D1AO60880 128 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 CDKN1BP46527 198 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 BEAN1Q3B7T3 259 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 NUDT11Q96G61 164 aa6.91□□□□□ -1.3
SDCBP-212ENST00000523483 TRAV2A0A0B4J234 112 aa6.9□□□□□ -1.3
SDCBP-212ENST00000523483 PRM2P04554 102 aa6.9□□□□□ -1.3
SDCBP-212ENST00000523483 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
SDCBP-212ENST00000523483 C10orf91Q5T1B1 145 aa6.9□□□□□ -1.3
SDCBP-212ENST00000523483 CRIP1P50238 77 aa6.9□□□□□ -1.3
SDCBP-212ENST00000523483 NUTF2P61970 127 aaKnown RBP6.9□□□□□ -1.3
SDCBP-212ENST00000523483 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
SDCBP-212ENST00000523483 A0A1W2PPQ1 181 aa6.9□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1BA6NDE4 496 aaKnown RBP6.9□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1EA6NEQ0 496 aaKnown RBP6.9□□□□□ -1.31
SDCBP-212ENST00000523483 SPRY2O43597 315 aa6.9□□□□□ -1.31
SDCBP-212ENST00000523483 RBMY1DP0C7P1 496 aaKnown RBP6.9□□□□□ -1.31
SDCBP-212ENST00000523483 TSPOP30536 169 aa6.9□□□□□ -1.31
SDCBP-212ENST00000523483 KRTAP10-11P60412 298 aa6.9□□□□□ -1.31
SDCBP-212ENST00000523483 MLST8Q9BVC4 326 aa6.9□□□□□ -1.31
SDCBP-212ENST00000523483 FABP5P3A8MUU1 101 aa6.89□□□□□ -1.31
SDCBP-212ENST00000523483 ZFAND2AQ8N6M9 145 aa6.89□□□□□ -1.31
SDCBP-212ENST00000523483 S100A4P26447 101 aaKnown RBP6.89□□□□□ -1.31
SDCBP-212ENST00000523483 RHEBQ15382 184 aa6.89□□□□□ -1.31
SDCBP-212ENST00000523483 DEFB121Q5J5C9 76 aa6.89□□□□□ -1.31
SDCBP-212ENST00000523483 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
SDCBP-212ENST00000523483 FBLL1A6NHQ2 334 aaKnown RBP6.89□□□□□ -1.31
SDCBP-212ENST00000523483 PFN1P07737 140 aaKnown RBP6.89□□□□□ -1.31
SDCBP-212ENST00000523483 B4DEV8 164 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 LEPP41159 167 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-212ENST00000523483 FAM159AQ6UWV7 190 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 LINC01587Q99440 93 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 BIN3Q9NQY0 253 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 C7orf71A4D174 169 aa6.88□□□□□ -1.31
SDCBP-212ENST00000523483 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
SDCBP-212ENST00000523483 IGHV4-30-4P0DP06 118 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 S100PP25815 95 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 MRAPQ8TCY5 172 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 LY96Q9Y6Y9 160 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 CBY3A6NI87 242 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 EMP1P54849 157 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 ANXA2RQ3ZCQ2 193 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 AMTNQ6UX39 209 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
SDCBP-212ENST00000523483 PGLYRP4Q96LB8 373 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 ANK2Q01484 3957 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 GNRH2O43555 120 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 MRPL54Q6P161 138 aaKnown RBP6.87□□□□□ -1.31
SDCBP-212ENST00000523483 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
SDCBP-212ENST00000523483 HIGD1CA8MV81 97 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 NDUFS6O75380 124 aaKnown RBP6.86□□□□□ -1.31
SDCBP-212ENST00000523483 INSP01308 110 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 RAB4BP61018 213 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 DEFB135Q30KP9 77 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 NEU1Q99519 415 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 OSTCQ9NRP0 149 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 TP53TG3Q9ULZ0 132 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 V9GYV3 84 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 H3BVH4 76 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 PPP1R2P9O14990 202 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 CAMPP49913 170 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 Q8N1Y9 231 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 LENEPQ9Y5L5 61 aa6.86□□□□□ -1.31
SDCBP-212ENST00000523483 LOC102724200A0A096LPH7 203 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms