RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 K7EQM0 130 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 GPX1P07203 203 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 TEX261Q6UWH6 196 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 SGK494Q96LW2 274 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 KRTAP17-1Q9BYP8 105 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
VEGFA-222ENST00000520948 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
VEGFA-222ENST00000520948 H7BYZ3 331 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 J3KRW8 73 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 PEX7O00628 323 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 PRM2P04554 102 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-222ENST00000520948 BTN1A1Q13410 526 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-222ENST00000520948 LINC01587Q99440 93 aa13.02□□□□□ -0.33
VEGFA-222ENST00000520948 DEFB4AO15263 64 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
VEGFA-222ENST00000520948 TAS2R60P59551 318 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 TXNDC17Q9BRA2 123 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 TMEM208Q9BTX3 173 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 GNG13Q9P2W3 67 aa13.01□□□□□ -0.33
VEGFA-222ENST00000520948 TRAV34A0A0B4J273 112 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
VEGFA-222ENST00000520948 C11orf94C9JXX5 98 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 F6UZH7 168 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 AZU1P20160 251 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 RRN3P1Q2M238 152 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 Q6AWC8 147 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 Q6ZQT7 251 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
VEGFA-222ENST00000520948 TRBV6-1A0A0K0K1D8 114 aa12.99□□□□□ -0.33
VEGFA-222ENST00000520948 C2CD4CQ8TF44 421 aa12.99□□□□□ -0.33
VEGFA-222ENST00000520948 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
VEGFA-222ENST00000520948 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
VEGFA-222ENST00000520948 PLAC8L1A1L4L8 177 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 SAPCD1Q5SSQ6 148 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 PYGO2Q9BRQ0 406 aa12.98□□□□□ -0.33
VEGFA-222ENST00000520948 KLK5Q9Y337 293 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-222ENST00000520948 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 SCO2A0A1W2PP80 73 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 IFNA1P01562 189 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 BCL2P10415 239 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 TMEM183BQ1AE95 376 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 FMC1Q96HJ9 113 aa12.97□□□□□ -0.33
VEGFA-222ENST00000520948 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 TAGLN2P37802 199 aaKnown RBP12.96□□□□□ -0.33
VEGFA-222ENST00000520948 MEF2BQ02080 365 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-222ENST00000520948 ZNF493Q6ZR52 646 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 Q86TA4 180 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 RNASE8Q8TDE3 154 aaKnown RBP12.96□□□□□ -0.33
VEGFA-222ENST00000520948 C11orf52Q96A22 123 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 VAX2Q9UIW0 290 aa12.96□□□□□ -0.33
VEGFA-222ENST00000520948 S100A9P06702 114 aaKnown RBP12.95□□□□□ -0.34
VEGFA-222ENST00000520948 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-222ENST00000520948 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
VEGFA-222ENST00000520948 CELA1Q9UNI1 258 aa12.95□□□□□ -0.34
VEGFA-222ENST00000520948 ZFP30Q9Y2G7 519 aa12.95□□□□□ -0.34
VEGFA-222ENST00000520948 LTAP01374 205 aa12.94□□□□□ -0.34
VEGFA-222ENST00000520948 HTN1P15515 57 aa12.94□□□□□ -0.34
VEGFA-222ENST00000520948 AKR1C3P42330 323 aa12.94□□□□□ -0.34
VEGFA-222ENST00000520948 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
VEGFA-222ENST00000520948 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
VEGFA-222ENST00000520948 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-222ENST00000520948 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
VEGFA-222ENST00000520948 IGHV1OR15-1A0A075B7D0 117 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 TRAV21A0A0B4J279 112 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 PDE6DO43924 150 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 UBE2G1P62253 170 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 SMUG1Q53HV7 270 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 C11orf45Q8TAV5 145 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 DKK2Q9UBU2 259 aa12.93□□□□□ -0.34
VEGFA-222ENST00000520948 GCGP01275 180 aa12.92□□□□□ -0.34
VEGFA-222ENST00000520948 ZNF506Q5JVG8 444 aa12.92□□□□□ -0.34
VEGFA-222ENST00000520948 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
VEGFA-222ENST00000520948 PCNPQ8WW12 178 aaKnown RBP12.92□□□□□ -0.34
VEGFA-222ENST00000520948 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
VEGFA-222ENST00000520948 TP53TG3Q9ULZ0 132 aa12.92□□□□□ -0.34
VEGFA-222ENST00000520948 RGS13O14921 159 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
VEGFA-222ENST00000520948 SPART-AS1P0CW21 52 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 CRIP1P50238 77 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 EMP1P54849 157 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 NANOS2P60321 138 aaKnown RBP12.91□□□□□ -0.34
VEGFA-222ENST00000520948 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 FAM222AQ5U5X8 452 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
VEGFA-222ENST00000520948 DERL1Q9BUN8 251 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms