RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 HYLS1Q96M11 299 aa17.25■□□□□ 0.35
PVT1-204ENST00000517525 ACTR3CQ9C0K3 210 aaPredicted RBP17.25■□□□□ 0.35
PVT1-204ENST00000517525 SERTM2A0A1B0GWG4 89 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GAGE12BA1L429 117 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 SPINK4O60575 86 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GAGE7O76087 117 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GAGE12FP0CL80 117 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GAGE12GP0CL81 117 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GAGE12IP0CL82 117 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 GCHFRP30047 84 aa17.24■□□□□ 0.35
PVT1-204ENST00000517525 H3BNG1 76 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 CXorf1O96002 111 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 Q6ZQT7 251 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 Q6ZTI0 123 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 UBE2DNLQ8IWF7 75 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 TMEM167BQ9NRX6 74 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 TP53TG3Q9ULZ0 132 aa17.23■□□□□ 0.35
PVT1-204ENST00000517525 GOLT1AQ6ZVE7 132 aa17.22■□□□□ 0.35
PVT1-204ENST00000517525 C5orf17Q8NAS9 161 aa17.22■□□□□ 0.35
PVT1-204ENST00000517525 KLF12Q9Y4X4 402 aa17.22■□□□□ 0.35
PVT1-204ENST00000517525 Q6ZR54 194 aa17.21■□□□□ 0.35
PVT1-204ENST00000517525 CYTL1Q9NRR1 136 aa17.21■□□□□ 0.35
PVT1-204ENST00000517525 FRAS1Q86XX4 4008 aa17.2■□□□□ 0.34
PVT1-204ENST00000517525 HOXA5P20719 270 aa17.2■□□□□ 0.34
PVT1-204ENST00000517525 TDRG1Q3Y452 100 aa17.2■□□□□ 0.34
PVT1-204ENST00000517525 ARPC5O15511 151 aa17.19■□□□□ 0.34
PVT1-204ENST00000517525 ARPC5LQ9BPX5 153 aa17.19■□□□□ 0.34
PVT1-204ENST00000517525 TRGV1A0A0A0MS02 117 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 CTXND1A0A1B0GTU2 59 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 NUDT3O95989 172 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 TCRAP04437 139 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 OR5I1Q13606 314 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 ZNF345Q14585 488 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 LINC00336Q6ZUF6 198 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 SSX7Q7RTT5 188 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 TVP23CQ96ET8 276 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 TMPRSS5Q9H3S3 457 aa17.18■□□□□ 0.34
PVT1-204ENST00000517525 TRGV2A0A075B6R0 118 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 TRAV26-1A0A087WT03 109 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 A0A1W2PRE2 83 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 GNG5P63218 68 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 ZNF415Q09FC8 603 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 ZNF726P1Q15940 193 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 RPH3ALQ9UNE2 315 aa17.17■□□□□ 0.34
PVT1-204ENST00000517525 TRAV8-1A0A0A6YYK1 113 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 FBLL1A6NHQ2 334 aaKnown RBP17.16■□□□□ 0.34
PVT1-204ENST00000517525 HMSDA8MTL9 139 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 FAM159AQ6UWV7 190 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 ATG101Q9BSB4 218 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 TREM1Q9NP99 234 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 EPDR1Q9UM22 224 aa17.16■□□□□ 0.34
PVT1-204ENST00000517525 TRGV11A0A075B6L2 103 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 TRAV21A0A0B4J279 112 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 GGTLC3B5MD39 225 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 K7EQM0 130 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 CCL18P55774 89 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 SUMO1P63165 101 aaKnown RBP17.15■□□□□ 0.34
PVT1-204ENST00000517525 KCNRGQ8N5I3 272 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 SPXQ9BT56 116 aa17.15■□□□□ 0.34
PVT1-204ENST00000517525 NACAE9PAV3 2078 aa17.14■□□□□ 0.33
PVT1-204ENST00000517525 MUC4Q99102 2169 aa17.14■□□□□ 0.33
PVT1-204ENST00000517525 MUC21Q5SSG8 566 aa17.14■□□□□ 0.33
PVT1-204ENST00000517525 AKR1C8PQ5T2L2 129 aa17.14■□□□□ 0.33
PVT1-204ENST00000517525 ZNRF2Q8NHG8 242 aa17.14■□□□□ 0.33
PVT1-204ENST00000517525 IGLV2-11P01706 119 aa17.13■□□□□ 0.33
PVT1-204ENST00000517525 RASL10AQ92737 203 aa17.13■□□□□ 0.33
PVT1-204ENST00000517525 NDFIP1Q9BT67 221 aa17.13■□□□□ 0.33
PVT1-204ENST00000517525 MDFICQ9P1T7 246 aa17.13■□□□□ 0.33
PVT1-204ENST00000517525 SMLR1H3BR10 107 aa17.12■□□□□ 0.33
PVT1-204ENST00000517525 CYB561D1Q8N8Q1 229 aa17.12■□□□□ 0.33
PVT1-204ENST00000517525 TMEM75Q8N9X5 138 aa17.12■□□□□ 0.33
PVT1-204ENST00000517525 VSIG2Q96IQ7 327 aa17.12■□□□□ 0.33
PVT1-204ENST00000517525 NKX6-2Q9C056 277 aaPredicted RBP17.12■□□□□ 0.33
PVT1-204ENST00000517525 LINC00588Q9Y4M8 146 aa17.12■□□□□ 0.33
PVT1-204ENST00000517525 M0R2N4 97 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 SLAQ13239 276 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 TMEM183BQ1AE95 376 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 TMEM183AQ8IXX5 376 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 OR11H4Q8NGC9 324 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 MRPL16Q9NX20 251 aaKnown RBP17.11■□□□□ 0.33
PVT1-204ENST00000517525 PSG8Q9UQ74 426 aa17.11■□□□□ 0.33
PVT1-204ENST00000517525 IGLV2-18A0A075B6J9 118 aa17.1■□□□□ 0.33
PVT1-204ENST00000517525 A0A0D9SG52 128 aa17.1■□□□□ 0.33
PVT1-204ENST00000517525 A0A0J9YY99 117 aa17.1■□□□□ 0.33
PVT1-204ENST00000517525 RTL8CO15255 209 aa17.1■□□□□ 0.33
PVT1-204ENST00000517525 KCNS1Q96KK3 526 aa17.1■□□□□ 0.33
PVT1-204ENST00000517525 FLI1Q01543 452 aaPredicted RBP17.09■□□□□ 0.33
PVT1-204ENST00000517525 IQCF2Q8IXL9 164 aa17.09■□□□□ 0.33
PVT1-204ENST00000517525 DNAH17Q9UFH2 4485 aa17.08■□□□□ 0.33
PVT1-204ENST00000517525 IGHV3-16A0A0C4DH30 117 aa17.08■□□□□ 0.32
PVT1-204ENST00000517525 F6UZH7 168 aa17.08■□□□□ 0.32
PVT1-204ENST00000517525 SEC11BP0C7V7 166 aa17.08■□□□□ 0.32
PVT1-204ENST00000517525 SAPCD1Q5SSQ6 148 aa17.08■□□□□ 0.32
PVT1-204ENST00000517525 UPK3BQ9BT76 320 aa17.08■□□□□ 0.32
PVT1-204ENST00000517525 SGK494Q96LW2 274 aa17.07■□□□□ 0.32
PVT1-204ENST00000517525 KRTAP17-1Q9BYP8 105 aa17.07■□□□□ 0.32
PVT1-204ENST00000517525 SDF2L1Q9HCN8 221 aa17.07■□□□□ 0.32
PVT1-204ENST00000517525 PRO0255Q9UI72 69 aa17.07■□□□□ 0.32
PVT1-204ENST00000517525 DNAH2Q9P225 4427 aa17.07■□□□□ 0.32
PVT1-204ENST00000517525 HECTD4Q9Y4D8 3996 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms