RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
VEGFA-216ENST00000512683 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 PRR9Q5T870 116 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
VEGFA-216ENST00000512683 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 PHYHIPLQ96FC7 376 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
VEGFA-216ENST00000512683 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 C17orf112F2Z3M2 114 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 PAX4O43316 350 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 RNASE4P34096 147 aaKnown RBP8.62□□□□□ -1.03
VEGFA-216ENST00000512683 TCL1AP56279 114 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 LINC00315P59091 139 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
VEGFA-216ENST00000512683 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 Q6ZQT7 251 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
VEGFA-216ENST00000512683 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 OR7C2O60412 319 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 GPX1P07203 203 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 PET100P0DJ07 73 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 TMEM78Q5T7P6 136 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 IQCF2Q8IXL9 164 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
VEGFA-216ENST00000512683 RGS13O14921 159 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
VEGFA-216ENST00000512683 NXPH4O95158 308 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 ZNF138P52744 262 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 RANP62826 216 aaKnown RBP8.6□□□□□ -1.03
VEGFA-216ENST00000512683 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 Q8TAT8 98 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 BOLA1Q9Y3E2 137 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 ALG5Q9Y673 324 aa8.6□□□□□ -1.03
VEGFA-216ENST00000512683 IGHV1OR15-1A0A075B7D0 117 aa8.59□□□□□ -1.03
VEGFA-216ENST00000512683 IFNA5P01569 189 aa8.59□□□□□ -1.03
VEGFA-216ENST00000512683 CRYBA4P53673 196 aa8.59□□□□□ -1.03
VEGFA-216ENST00000512683 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
VEGFA-216ENST00000512683 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
VEGFA-216ENST00000512683 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
VEGFA-216ENST00000512683 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
VEGFA-216ENST00000512683 ORM1P02763 201 aa8.58□□□□□ -1.04
VEGFA-216ENST00000512683 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
VEGFA-216ENST00000512683 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
VEGFA-216ENST00000512683 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 EVI2AP22794 236 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 FHL2Q14192 279 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 ZNF266Q14584 549 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 SPXQ9BT56 116 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 LY96Q9Y6Y9 160 aa8.57□□□□□ -1.04
VEGFA-216ENST00000512683 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 CSN1S1P47710 185 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 TAS2R45P59539 299 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 RAB2AP61019 212 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 RASL10AQ92737 203 aa8.56□□□□□ -1.04
VEGFA-216ENST00000512683 A0A087WTM6 91 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 PGPA6NDG6 321 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 PTTG1O95997 202 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 XGP55808 180 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 ACOT6Q3I5F7 207 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-216ENST00000512683 Q5BKY6 102 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 Q6AWC8 147 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 OR10G4Q8NGN3 311 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 FRZBQ92765 325 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 HYLS1Q96M11 299 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 TXNDC17Q9BRA2 123 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 OTORQ9NRC9 128 aa8.55□□□□□ -1.04
VEGFA-216ENST00000512683 MRPL16Q9NX20 251 aaKnown RBP8.55□□□□□ -1.04
VEGFA-216ENST00000512683 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-216ENST00000512683 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
VEGFA-216ENST00000512683 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 SRIP30626 198 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 TIRAPP58753 221 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 MUC21Q5SSG8 566 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 PQLC2Q6ZP29 291 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 OR10G9Q8NGN4 311 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 OR10G7Q8NGN6 311 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
VEGFA-216ENST00000512683 TMED6Q8WW62 240 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 MSRB1Q9NZV6 116 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
VEGFA-216ENST00000512683 A0A1W2PPV4 95 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms