RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SERTM2	A0A1B0GWG4	89 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	C7orf71	A4D174	169 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	PGPEP1L	A6NFU8	196 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	IFNA1	P01562	189 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	SRP19	P09132	144 aa	Known RBP	10.49	□□□□□ -0.73
MATR3-238	ENST00000512107		Q8NAQ8	132 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	TREM1	Q9NP99	234 aa		10.49	□□□□□ -0.73
MATR3-238	ENST00000512107	RGS13	O14921	159 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	INS	P01308	110 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	LTA	P01374	205 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	RPL35	P42766	123 aa	Known RBP	10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	NUTF2	P61970	127 aa	Known RBP	10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	ZNF575	Q86XF7	245 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	ZC2HC1A	Q96GY0	325 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	TP53TG3	Q9ULZ0	132 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	TP53TG1	Q9Y2A0	90 aa		10.48	□□□□□ -0.73
MATR3-238	ENST00000512107	IGHV4-28	A0A0C4DH34	117 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	TRBV7-9	A0A0J9YWB2	115 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	PLAC8L1	A1L4L8	177 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	AMBP	P02760	352 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	GPX1	P07203	203 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	TSPO	P30536	169 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	FMC1	Q96HJ9	113 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	TCEAL7	Q9BRU2	100 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	MLST8	Q9BVC4	326 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	MED9	Q9NWA0	146 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	LENEP	Q9Y5L5	61 aa		10.47	□□□□□ -0.73
MATR3-238	ENST00000512107	NHLRC4	P0CG21	123 aa	Predicted RBP	10.46	□□□□□ -0.73
MATR3-238	ENST00000512107		Q6AWC8	147 aa		10.46	□□□□□ -0.73
MATR3-238	ENST00000512107	LINC01587	Q99440	93 aa		10.46	□□□□□ -0.73
MATR3-238	ENST00000512107	C1QTNF4	Q9BXJ3	329 aa		10.46	□□□□□ -0.73
MATR3-238	ENST00000512107	EIF5A2	Q9GZV4	153 aa	Known RBP	10.46	□□□□□ -0.73
MATR3-238	ENST00000512107		A0A0J9YWU9	116 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107		K7EQM0	130 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	PDE6D	O43924	150 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	GCG	P01275	180 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	CENPW	Q5EE01	88 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	MUC21	Q5SSG8	566 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	COX8C	Q7Z4L0	72 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	TXNDC17	Q9BRA2	123 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	PARL	Q9H300	379 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	ZMAT4	Q9H898	229 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	EDA2R	Q9HAV5	297 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	GOLT1B	Q9Y3E0	138 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107		U3KQK5	164 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	DNAH7	Q8WXX0	4024 aa		10.45	□□□□□ -0.74
MATR3-238	ENST00000512107	HTN1	P15515	57 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107	UBE2G1	P62253	170 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107	BAGE2	Q86Y30	109 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107	TMEM183A	Q8IXX5	376 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107	NEU1	Q99519	415 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107	CELA1	Q9UNI1	258 aa		10.44	□□□□□ -0.74
MATR3-238	ENST00000512107		K7EN84	100 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	GNRH2	O43555	120 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	SH2D1A	O60880	128 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	TAGLN2	P37802	199 aa	Known RBP	10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	CEBPG	P53567	150 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	TAS2R60	P59551	318 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	ZNF674	Q2M3X9	581 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	ANXA2R	Q3ZCQ2	193 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	SMUG1	Q53HV7	270 aa		10.43	□□□□□ -0.74
MATR3-238	ENST00000512107	IGKV3D-20	A0A0C4DH25	116 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	TMEM250	H0YL14	139 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107		H7BYZ3	331 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	RAB14	P61106	215 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	OR5I1	Q13606	314 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	SAPCD1	Q5SSQ6	148 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	C11orf72	Q8NBR9	251 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	RNASE8	Q8TDE3	154 aa	Known RBP	10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	C20orf144	Q9BQM9	153 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	TMEM208	Q9BTX3	173 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	ZFP30	Q9Y2G7	519 aa		10.42	□□□□□ -0.74
MATR3-238	ENST00000512107	IGHV1OR15-1	A0A075B7D0	117 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	FBLL1	A6NHQ2	334 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	S100A9	P06702	114 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	TMEM256	Q8N2U0	113 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	OCC1	Q8TAD7	63 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	LINC00467	Q9BRT7	94 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	NIPSNAP3B	Q9BS92	247 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	NDFIP1	Q9BT67	221 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	MDFIC	Q9P1T7	246 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	NAGK	Q9UJ70	344 aa		10.41	□□□□□ -0.74
MATR3-238	ENST00000512107	TRAV21	A0A0B4J279	112 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	TYMS	P04818	313 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	PFN1	P07737	140 aa	Known RBP	10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	MIF	P14174	115 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	EMP1	P54849	157 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	RPL19	P84098	196 aa	Known RBP	10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	RRN3P1	Q2M238	152 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	IL17D	Q8TAD2	202 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	STAB2	Q8WWQ8	2551 aa		10.4	□□□□□ -0.74
MATR3-238	ENST00000512107	LINC00862	A6NCI5	91 aa		10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	NDUFS6	O75380	124 aa	Known RBP	10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	GNG4	P50150	75 aa		10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	PEA15	Q15121	130 aa		10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	EIF4E3	Q8N5X7	224 aa	Known RBP	10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	PYGO2	Q9BRQ0	406 aa		10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	GSN-AS1	Q9NRJ2	163 aa		10.39	□□□□□ -0.75
MATR3-238	ENST00000512107	IGHV3-16	A0A0C4DH30	117 aa		10.38	□□□□□ -0.75
MATR3-238	ENST00000512107	C19orf71	A6NCJ1	209 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms