RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DNAH10OSP0CZ25 163 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 INAFM2P0DMQ5 153 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 IL7P13232 177 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 PLP1P60201 277 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 PPP1R1AQ13522 171 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 TMEM128Q5BJH2 165 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 SPANXN2Q5MJ10 180 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 Q6ZTI0 123 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 VSIG2Q96IQ7 327 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 CIB3Q96Q77 187 aaPredicted RBP4.53□□□□□ -1.68
COPS4-209ENST00000511653 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
COPS4-209ENST00000511653 TRAV34A0A0B4J273 112 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 ADAP1O75689 374 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 C1QBP02746 253 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 KRTAP10-1P60331 282 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 RRAS2P62070 204 aaPredicted RBP4.52□□□□□ -1.69
COPS4-209ENST00000511653 POLR2GP62487 172 aaKnown RBP eCLIP4.52□□□□□ -1.69
COPS4-209ENST00000511653 SLC38A11Q08AI6 406 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 Q5VSD8 79 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 LYPD1Q8N2G4 141 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 LRRC20Q8TCA0 184 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 SOSTQ9BQB4 213 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 ARL6Q9H0F7 186 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 ARV1Q9H2C2 271 aa4.52□□□□□ -1.69
COPS4-209ENST00000511653 ZNF331Q9NQX6 463 aaPredicted RBP4.52□□□□□ -1.69
COPS4-209ENST00000511653 STRAPQ9Y3F4 350 aaKnown RBP4.52□□□□□ -1.69
COPS4-209ENST00000511653 TRAV12-3A0A0B4J271 114 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 SSSCA1O60232 199 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 SFT2D2O95562 160 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 RLN2P04090 185 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 METTL15P1P0C7V9 234 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 HAMPP81172 84 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 LCN15Q6UWW0 184 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 SLC51BQ86UW2 128 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 OCC1Q8TAD7 63 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 DNAJC4Q9NNZ3 241 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 LINC00862A6NCI5 91 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 H3BNG1 76 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 K7EPK0 472 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 PLA2G10O15496 165 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 TSC22D2O75157 780 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 CT45A10P0DMU9 189 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 IGLC2P0DOY2 106 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 S100A7P31151 101 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 SELENOTP62341 195 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 ARL16Q0P5N6 197 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 PRR27Q6MZM9 219 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 TMEM14EPQ6UXP3 125 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 LINC00305Q7Z4B0 112 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 C11orf72Q8NBR9 251 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 C20orf144Q9BQM9 153 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 PSENENQ9NZ42 101 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
COPS4-209ENST00000511653 FABP12A6NFH5 140 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 H3BQ15 152 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 SIVA1O15304 175 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 NXPH4O95158 308 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 SMR3BP02814 79 aaPredicted RBP4.5□□□□□ -1.69
COPS4-209ENST00000511653 CXCL2P19875 107 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 FAUP35544 74 aaKnown RBP4.5□□□□□ -1.69
COPS4-209ENST00000511653 ERVFC1-1P60608 527 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 DAZ2Q13117 558 aaKnown RBP4.5□□□□□ -1.69
COPS4-209ENST00000511653 OPCMLQ14982 345 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 ZNF431Q8TF32 576 aaPredicted RBP4.5□□□□□ -1.69
COPS4-209ENST00000511653 TMEM37Q8WXS4 190 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 SLC50A1Q9BRV3 221 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
COPS4-209ENST00000511653 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 A0A087WTM6 91 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 TRGV1A0A0A0MS02 117 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 PIGBOS1A0A0B4J2F0 54 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 M0R3E3 92 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 AGPAT2O15120 278 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 BTN1A1Q13410 526 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 Q6ZQT7 251 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 C9orf62Q8N4C0 152 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 TOMM5Q8N4H5 51 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 MGST2Q99735 147 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
COPS4-209ENST00000511653 MARVELD1Q9BSK0 173 aa4.49□□□□□ -1.69
COPS4-209ENST00000511653 RCL1Q9Y2P8 373 aaKnown RBP4.49□□□□□ -1.69
COPS4-209ENST00000511653 TRGV2A0A075B6R0 118 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 C9orf170A2RU37 121 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 COX7A2P2O60397 106 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 LEPP41159 167 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 UBE2MP61081 183 aaKnown RBP4.48□□□□□ -1.69
COPS4-209ENST00000511653 CTAG1AP78358 180 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 PYDC2Q56P42 97 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 PRR9Q5T870 116 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 ZNF546Q86UE3 836 aa4.48□□□□□ -1.69
COPS4-209ENST00000511653 BPIFA4PQ86YQ2 179 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms