RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 IFNA7P01567 189 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 IGKV3-20P01619 116 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 HBE1P02100 147 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 PRM2P04554 102 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 CDKN1BP46527 198 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 ZNF138P52744 262 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 TMEM183BQ1AE95 376 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 DEFB135Q30KP9 77 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 GFI1BQ5VTD9 330 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 Q6AWC8 147 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 MORN3Q6PF18 240 aaPredicted RBP3.56□□□□□ -1.84
LMNB1-208ENST00000504788 ZNF767PQ75MW2 155 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 CYB561D1Q8N8Q1 229 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 Q8NAQ8 132 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 HIST1H2BAQ96A08 127 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 TXNDC17Q9BRA2 123 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 EDA2RQ9HAV5 297 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 RETNQ9HD89 108 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 MANBALQ9NQG1 85 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 GNG13Q9P2W3 67 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
LMNB1-208ENST00000504788 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 SERTM2A0A1B0GWG4 89 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 RBFOX3A6NFN3 312 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 TEX46H3BTG2 121 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 SRP19P09132 144 aaKnown RBP3.56□□□□□ -1.84
LMNB1-208ENST00000504788 FXYD7P58549 80 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 FLI1Q01543 452 aaPredicted RBP3.56□□□□□ -1.84
LMNB1-208ENST00000504788 DEFB121Q5J5C9 76 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 EBLN2Q6P2I7 272 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 Q86TA4 180 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 IL17DQ8TAD2 202 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 C8orf49Q96NF6 230 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 NEU1Q99519 415 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 VAX2Q9UIW0 290 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 PSG8Q9UQ74 426 aa3.56□□□□□ -1.84
LMNB1-208ENST00000504788 TMEM250H0YL14 139 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 SPRY2O43597 315 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 ATP6V1G1O75348 118 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 CA1P00915 261 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-208ENST00000504788 AZU1P20160 251 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 PPT1P50897 306 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 APOC4P55056 127 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 BTN1A1Q13410 526 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 TDRG1Q3Y452 100 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 CST9LP1Q5W188 147 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 IQCF2Q8IXL9 164 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 C11orf72Q8NBR9 251 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 OR10J6PQ8NGY7 276 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 RNASE8Q8TDE3 154 aaKnown RBP3.55□□□□□ -1.84
LMNB1-208ENST00000504788 ZC2HC1AQ96GY0 325 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 LINC00467Q9BRT7 94 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 TUBA4BQ9H853 241 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 MED9Q9NWA0 146 aa3.55□□□□□ -1.84
LMNB1-208ENST00000504788 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TENM2Q9NT68 2774 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 PGPEP1LA6NFU8 196 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 FBLL1A6NHQ2 334 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 K7EN84 100 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TAGLN2P37802 199 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 RPL35P42766 123 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 ZNF674Q2M3X9 581 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TOR2AQ5JU69 321 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TMEM78Q5T7P6 136 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TMEM183AQ8IXX5 376 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 EIF4E3Q8N5X7 224 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 CMTM2Q8TAZ6 248 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 FMC1Q96HJ9 113 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C20orf144Q9BQM9 153 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TRAV12-3A0A0B4J271 114 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C7orf71A4D174 169 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 RAB19A4D1S5 217 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 LINC00862A6NCI5 91 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C19orf71A6NCJ1 209 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C9JCJ5 164 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 PDE6DO43924 150 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 AMBPP02760 352 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 NHLRC4P0CG21 123 aaPredicted RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 ADCYAP1P18509 176 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 TSPOP30536 169 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 CSN1S1P47710 185 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 NUTF2P61970 127 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 LINC00612Q8N6U2 182 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 RCHY1Q96PM5 261 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 SPATA25Q9BR10 227 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C1QTNF4Q9BXJ3 329 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 PARLQ9H300 379 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 C11orf68Q9H3H3 251 aaKnown RBP3.54□□□□□ -1.84
LMNB1-208ENST00000504788 SMDT1Q9H4I9 107 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 RPH3ALQ9UNE2 315 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 ZFP30Q9Y2G7 519 aa3.54□□□□□ -1.84
LMNB1-208ENST00000504788 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 IGHV4-28A0A0C4DH34 117 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 F6UZH7 168 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 GCGP01275 180 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 PFN1P07737 140 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms