RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 KRTDAPP60985 99 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 CHCHD1Q96BP2 118 aaKnown RBP16.16■□□□□ 0.18
FGFR1-223ENST00000496296 URB1-AS1Q96HZ7 61 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 SNHG12Q9BXW3 62 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 ESM1Q9NQ30 184 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 SETD2Q9BYW2 2564 aaPredicted RBP16.16■□□□□ 0.18
FGFR1-223ENST00000496296 RPS20P60866 119 aaKnown RBP16.16■□□□□ 0.18
FGFR1-223ENST00000496296 TDRG1Q3Y452 100 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 ZNF493Q6ZR52 646 aa16.16■□□□□ 0.18
FGFR1-223ENST00000496296 HSBP1O75506 76 aa16.15■□□□□ 0.18
FGFR1-223ENST00000496296 ARMS2P0C7Q2 107 aa16.15■□□□□ 0.18
FGFR1-223ENST00000496296 FOSL1P15407 271 aa16.15■□□□□ 0.18
FGFR1-223ENST00000496296 ASCL2Q99929 193 aa16.15■□□□□ 0.18
FGFR1-223ENST00000496296 VGLL1Q99990 258 aa16.15■□□□□ 0.18
FGFR1-223ENST00000496296 TMEM189A5PLL7 270 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 RNASE1P07998 156 aaKnown RBP16.14■□□□□ 0.17
FGFR1-223ENST00000496296 BMI1P35226 326 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 Q6ZSV7 163 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 RNF152Q8N8N0 203 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 UBE2E2Q96LR5 201 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 NIPBLQ6KC79 2804 aaeCLIP16.14■□□□□ 0.17
FGFR1-223ENST00000496296 C3orf79P0CE67 100 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 NUTF2P61970 127 aaKnown RBP16.14■□□□□ 0.17
FGFR1-223ENST00000496296 FAM19A2Q8N3H0 131 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 KLHDC1Q8N7A1 406 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 MYOZ3Q8TDC0 251 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 CLEC5AQ9NY25 188 aa16.14■□□□□ 0.17
FGFR1-223ENST00000496296 ZNF207O43670 478 aaKnown RBP16.13■□□□□ 0.17
FGFR1-223ENST00000496296 HLA-DMBP28068 263 aa16.13■□□□□ 0.17
FGFR1-223ENST00000496296 FAM106AQ4KMX7 169 aa16.13■□□□□ 0.17
FGFR1-223ENST00000496296 BORCS7Q96B45 105 aa16.13■□□□□ 0.17
FGFR1-223ENST00000496296 JMJD8Q96S16 334 aa16.13■□□□□ 0.17
FGFR1-223ENST00000496296 CTRLP40313 264 aa16.12■□□□□ 0.17
FGFR1-223ENST00000496296 HILS1P60008 231 aa16.12■□□□□ 0.17
FGFR1-223ENST00000496296 PAM16Q9Y3D7 125 aa16.12■□□□□ 0.17
FGFR1-223ENST00000496296 LGALS1P09382 135 aaKnown RBP16.12■□□□□ 0.17
FGFR1-223ENST00000496296 UNQ9165/PRO28630Q6UXU0 137 aa16.12■□□□□ 0.17
FGFR1-223ENST00000496296 PPP1R14DQ9NXH3 145 aa16.12■□□□□ 0.17
FGFR1-223ENST00000496296 RNASEKQ6P5S7 137 aaKnown RBP16.11■□□□□ 0.17
FGFR1-223ENST00000496296 TRAV8-2A0A0B4J237 113 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGHV3-66A0A0C4DH42 116 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 NTF3P20783 257 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 ZNF705AQ6ZN79 300 aaPredicted RBP16.1■□□□□ 0.17
FGFR1-223ENST00000496296 GPHB5Q86YW7 130 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 GLMPQ8WWB7 406 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 NF1P21359 2839 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGHV3OR16-13A0A075B7E8 117 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGHV3-74A0A0B4J1X5 117 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 M0R2Z0 102 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGLC6P0CF74 106 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 ZNF80P51504 273 aaPredicted RBP16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGFL4Q6B9Z1 124 aa16.1■□□□□ 0.17
FGFR1-223ENST00000496296 IGHV3-49A0A0A0MS15 119 aa16.09■□□□□ 0.17
FGFR1-223ENST00000496296 PMCHL1Q16048 86 aa16.09■□□□□ 0.17
FGFR1-223ENST00000496296 LYZL1Q6UWQ5 148 aa16.09■□□□□ 0.17
FGFR1-223ENST00000496296 ZNF575Q86XF7 245 aa16.09■□□□□ 0.17
FGFR1-223ENST00000496296 Q8TAT8 98 aa16.09■□□□□ 0.17
FGFR1-223ENST00000496296 DAZ1Q9NQZ3 744 aaKnown RBP16.09■□□□□ 0.17
FGFR1-223ENST00000496296 SONP18583 2426 aaKnown RBP16.09■□□□□ 0.17
FGFR1-223ENST00000496296 C2orf70A6NJV1 201 aa16.08■□□□□ 0.17
FGFR1-223ENST00000496296 PRAC2D3DTV9 90 aa16.08■□□□□ 0.17
FGFR1-223ENST00000496296 PRB4P10163 310 aaPredicted RBP16.08■□□□□ 0.17
FGFR1-223ENST00000496296 U3KQK5 164 aa16.08■□□□□ 0.17
FGFR1-223ENST00000496296 ANK3Q12955 4377 aaKnown RBP16.08■□□□□ 0.16
FGFR1-223ENST00000496296 K7EMT4 169 aa16.08■□□□□ 0.16
FGFR1-223ENST00000496296 LINC00614P0C842 121 aa16.08■□□□□ 0.16
FGFR1-223ENST00000496296 C8orf86Q6ZUL3 223 aa16.08■□□□□ 0.16
FGFR1-223ENST00000496296 CNFNQ9BYD5 112 aa16.08■□□□□ 0.16
FGFR1-223ENST00000496296 UFC1Q9Y3C8 167 aa16.08■□□□□ 0.16
FGFR1-223ENST00000496296 MXRA5Q9NR99 2828 aa16.07■□□□□ 0.16
FGFR1-223ENST00000496296 FABP5P3A8MUU1 101 aa16.07■□□□□ 0.16
FGFR1-223ENST00000496296 LINC01559Q495D7 138 aa16.07■□□□□ 0.16
FGFR1-223ENST00000496296 OR5AL1P0C617 328 aa16.06■□□□□ 0.16
FGFR1-223ENST00000496296 EBLN2Q6P2I7 272 aa16.06■□□□□ 0.16
FGFR1-223ENST00000496296 C9orf47Q6ZRZ4 202 aa16.06■□□□□ 0.16
FGFR1-223ENST00000496296 C16orf95Q9H693 158 aa16.06■□□□□ 0.16
FGFR1-223ENST00000496296 BTF3P20290 206 aaKnown RBP16.05■□□□□ 0.16
FGFR1-223ENST00000496296 SPATA45Q537H7 98 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
FGFR1-223ENST00000496296 IGHV7-4-1A0A0J9YVY3 117 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 CRXO43186 299 aaPredicted RBP16.05■□□□□ 0.16
FGFR1-223ENST00000496296 ERCC8Q13216 396 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 RNF182Q8N6D2 247 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 FER1L6-AS1Q8NA97 138 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 AGPAT4-IT1Q9H0P7 198 aa16.05■□□□□ 0.16
FGFR1-223ENST00000496296 IGHV1-24A0A0C4DH33 117 aa16.04■□□□□ 0.16
FGFR1-223ENST00000496296 HIST1H1AQ02539 215 aaPredicted RBP16.04■□□□□ 0.16
FGFR1-223ENST00000496296 KHDC1LQ5JSQ8 128 aa16.04■□□□□ 0.16
FGFR1-223ENST00000496296 FAM104BQ5XKR9 115 aa16.04■□□□□ 0.16
FGFR1-223ENST00000496296 UQCR10Q9UDW1 63 aa16.04■□□□□ 0.16
FGFR1-223ENST00000496296 C20orf202A1L168 122 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 INAFM1C9JVW0 142 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 ZNF138P52744 262 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 TM4SF20Q53R12 229 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 PRR31Q5SQ13 230 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 LENEPQ9Y5L5 61 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 IGHV4OR15-8A0A075B7B6 117 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 A0A087WW49 117 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 TCAPO15273 167 aa16.03■□□□□ 0.16
FGFR1-223ENST00000496296 C4orf3Q8WVX3 66 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 692 ms