RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SERTM2A0A1B0GWG4 89 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 KANTRA0A1W2PQU2 76 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 P0DMU3 169 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 FAM231AP0DMU4 169 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 FAM231CP0DMU5 169 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 SUMO1P63165 101 aaKnown RBP4.94□□□□□ -1.62
TOP3A-207ENST00000493648 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF345Q14585 488 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 GOLT1AQ6ZVE7 132 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 IQCF2Q8IXL9 164 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 KCNRGQ8N5I3 272 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 C15orf53Q8NAA6 179 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 Q8TAT8 98 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 CYTL1Q9NRR1 136 aa4.94□□□□□ -1.62
TOP3A-207ENST00000493648 A0A1W2PRE2 83 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GAGE12BA1L429 117 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GAGE7O76087 117 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GAGE12FP0CL80 117 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GAGE12GP0CL81 117 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GAGE12IP0CL82 117 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 EIF5AP63241 154 aaKnown RBP4.93□□□□□ -1.62
TOP3A-207ENST00000493648 TMEM88Q6PEY1 159 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 FAM159AQ6UWV7 190 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 POM121L12Q8N7R1 296 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 OR11H4Q8NGC9 324 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 STOML3Q8TAV4 291 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 NDFIP1Q9BT67 221 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 NKX6-2Q9C056 277 aaPredicted RBP4.93□□□□□ -1.62
TOP3A-207ENST00000493648 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 GSN-AS1Q9NRJ2 163 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 EPDR1Q9UM22 224 aa4.93□□□□□ -1.62
TOP3A-207ENST00000493648 RYR3Q15413 4870 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 TRGV2A0A075B6R0 118 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 TRAV21A0A0B4J279 112 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 FBLL1A6NHQ2 334 aaKnown RBP4.92□□□□□ -1.62
TOP3A-207ENST00000493648 BCL2L11O43521 198 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 PFDN1O60925 122 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 IFNA7P01567 189 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 TCRAP04437 139 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 SEC11BP0C7V7 166 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 GNG5P63218 68 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 OR5I1Q13606 314 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 RNF212Q495C1 297 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 MUC21Q5SSG8 566 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 IBA57Q5T440 356 aaKnown RBP4.92□□□□□ -1.62
TOP3A-207ENST00000493648 PRR9Q5T870 116 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 Q6AWC8 147 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 SSX7Q7RTT5 188 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 UBE2DNLQ8IWF7 75 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 LINC00612Q8N6U2 182 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 C11orf72Q8NBR9 251 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 LYSTQ99698 3801 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF471Q9BX82 626 aaPredicted RBP4.92□□□□□ -1.62
TOP3A-207ENST00000493648 TP53TG3Q9ULZ0 132 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 PSG8Q9UQ74 426 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 KLF12Q9Y4X4 402 aa4.92□□□□□ -1.62
TOP3A-207ENST00000493648 RYR2Q92736 4967 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TRGV1A0A0A0MS02 117 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TRAV8-1A0A0A6YYK1 113 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 UMAD1C9J7I0 102 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 F6UZH7 168 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 SPINK4O60575 86 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 NUDT3O95989 172 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TPT1P13693 172 aaKnown RBP4.91□□□□□ -1.62
TOP3A-207ENST00000493648 PPT1P50897 306 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 FGF8P55075 233 aaPredicted RBP4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TCL1AP56279 114 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 UBE2G2P60604 165 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 FLI1Q01543 452 aaPredicted RBP4.91□□□□□ -1.62
TOP3A-207ENST00000493648 ZNF415Q09FC8 603 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 LGALS9BQ3B8N2 356 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 SAPCD1Q5SSQ6 148 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 DPPA3Q6W0C5 159 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 Q6ZQT7 251 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 Q6ZTI0 123 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TMUB2Q71RG4 321 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 AKAP14Q86UN6 197 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TCTE3Q8IZS6 198 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 CYB561D1Q8N8Q1 229 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 KCNS1Q96KK3 526 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 SGK494Q96LW2 274 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 ATG101Q9BSB4 218 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 TMPRSS5Q9H3S3 457 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 NAGKQ9UJ70 344 aa4.91□□□□□ -1.62
TOP3A-207ENST00000493648 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.62
TOP3A-207ENST00000493648 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
TOP3A-207ENST00000493648 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
TOP3A-207ENST00000493648 GGTLC3B5MD39 225 aa4.9□□□□□ -1.63
TOP3A-207ENST00000493648 H3BNG1 76 aa4.9□□□□□ -1.63
TOP3A-207ENST00000493648 TMEM183BQ1AE95 376 aa4.9□□□□□ -1.63
TOP3A-207ENST00000493648 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
TOP3A-207ENST00000493648 ZFP69Q49AA0 526 aa4.9□□□□□ -1.63
TOP3A-207ENST00000493648 EIF5AL1Q6IS14 154 aaKnown RBP4.9□□□□□ -1.63
TOP3A-207ENST00000493648 PRNTQ86SH4 94 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms