RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ASCL2Q99929 193 aa13.64□□□□□ -0.23
MCF2L-230ENST00000491028 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
MCF2L-230ENST00000491028 CRXO43186 299 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-230ENST00000491028 INSP01308 110 aa13.63□□□□□ -0.23
MCF2L-230ENST00000491028 C8orf49Q96NF6 230 aa13.63□□□□□ -0.23
MCF2L-230ENST00000491028 C20orf144Q9BQM9 153 aa13.63□□□□□ -0.23
MCF2L-230ENST00000491028 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
MCF2L-230ENST00000491028 TMEM218A2RU14 115 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 C7orf71A4D174 169 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 GIG44P09565 113 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-230ENST00000491028 DEFB121Q5J5C9 76 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 GFI1BQ5VTD9 330 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 MRAPQ8TCY5 172 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 XCL2Q9UBD3 114 aa13.62□□□□□ -0.23
MCF2L-230ENST00000491028 TRAV12-2A0A075B6T6 113 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 J3KRW8 73 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 GCGP01275 180 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 IGLV2-8P01709 118 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 BTN1A1Q13410 526 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 PRR9Q5T870 116 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 Q6AWC8 147 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
MCF2L-230ENST00000491028 RNASE4P34096 147 aaKnown RBP13.6□□□□□ -0.23
MCF2L-230ENST00000491028 KIR3DS1Q14943 382 aa13.6□□□□□ -0.23
MCF2L-230ENST00000491028 NHLRC2Q8NBF2 726 aa13.6□□□□□ -0.23
MCF2L-230ENST00000491028 ZC2HC1AQ96GY0 325 aa13.6□□□□□ -0.23
MCF2L-230ENST00000491028 NIPSNAP3BQ9BS92 247 aa13.6□□□□□ -0.23
MCF2L-230ENST00000491028 NAT8Q9UHE5 227 aa13.6□□□□□ -0.23
MCF2L-230ENST00000491028 TRAV21A0A0B4J279 112 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 PGPEP1LA6NFU8 196 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 DEFA6Q01524 100 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 TMEM241Q24JQ0 296 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 Q6ZWC4 215 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 TMEM256Q8N2U0 113 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
MCF2L-230ENST00000491028 TRAV12-3A0A0B4J271 114 aa13.58□□□□□ -0.24
MCF2L-230ENST00000491028 PFN1P07737 140 aaKnown RBP13.58□□□□□ -0.24
MCF2L-230ENST00000491028 MGST1P10620 155 aaKnown RBP13.58□□□□□ -0.24
MCF2L-230ENST00000491028 ZNF80P51504 273 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-230ENST00000491028 LINC01551Q86U37 167 aa13.58□□□□□ -0.24
MCF2L-230ENST00000491028 OCC1Q8TAD7 63 aa13.58□□□□□ -0.24
MCF2L-230ENST00000491028 SEC11CQ9BY50 192 aa13.58□□□□□ -0.24
MCF2L-230ENST00000491028 GOLT1BQ9Y3E0 138 aa13.58□□□□□ -0.24
MCF2L-230ENST00000491028 FABP5P3A8MUU1 101 aa13.57□□□□□ -0.24
MCF2L-230ENST00000491028 F8W036 122 aa13.57□□□□□ -0.24
MCF2L-230ENST00000491028 ZNF324O75467 553 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-230ENST00000491028 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
MCF2L-230ENST00000491028 H7BYZ3 331 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 RBMY1A1P0DJD3 496 aaKnown RBP13.56□□□□□ -0.24
MCF2L-230ENST00000491028 RBMY1CP0DJD4 496 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 ADCYAP1P18509 176 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 CRIP1P50238 77 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 RBMY1FQ15415 496 aaKnown RBP13.56□□□□□ -0.24
MCF2L-230ENST00000491028 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 C1orf158Q8N1D5 194 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 TP53TG1Q9Y2A0 90 aa13.56□□□□□ -0.24
MCF2L-230ENST00000491028 K7EN84 100 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 SH2D1AO60880 128 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 RPL23P62829 140 aaKnown RBP13.55□□□□□ -0.24
MCF2L-230ENST00000491028 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-230ENST00000491028 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 ZNF705AQ6ZN79 300 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-230ENST00000491028 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 TMEM208Q9BTX3 173 aa13.55□□□□□ -0.24
MCF2L-230ENST00000491028 KRBOX1C9JBD0 128 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 C10orf91Q5T1B1 145 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 RNF183Q96D59 192 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 B9D2Q9BPU9 175 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 LINC00467Q9BRT7 94 aa13.54□□□□□ -0.24
MCF2L-230ENST00000491028 C19orf71A6NCJ1 209 aa13.53□□□□□ -0.24
MCF2L-230ENST00000491028 ADIRFQ15847 76 aa13.53□□□□□ -0.24
MCF2L-230ENST00000491028 FAM159AQ6UWV7 190 aa13.53□□□□□ -0.24
MCF2L-230ENST00000491028 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
MCF2L-230ENST00000491028 DAZAP1Q96EP5 407 aaKnown RBP13.53□□□□□ -0.24
MCF2L-230ENST00000491028 CARHSP1Q9Y2V2 147 aaKnown RBP13.53□□□□□ -0.24
MCF2L-230ENST00000491028 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 OR5I1Q13606 314 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 Q6ZQT7 251 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 ISOC2Q96AB3 205 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 KCNS1Q96KK3 526 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 LINC01587Q99440 93 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 NEU1Q99519 415 aa13.52□□□□□ -0.25
MCF2L-230ENST00000491028 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 SPRY2O43597 315 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 TDRG1Q3Y452 100 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 LINC01559Q495D7 138 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 SPATA25Q9BR10 227 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 NAGKQ9UJ70 344 aa13.51□□□□□ -0.25
MCF2L-230ENST00000491028 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
MCF2L-230ENST00000491028 P01737 135 aa13.5□□□□□ -0.25
MCF2L-230ENST00000491028 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
MCF2L-230ENST00000491028 IBA57Q5T440 356 aaKnown RBP13.5□□□□□ -0.25
MCF2L-230ENST00000491028 C11orf21Q9P2W6 132 aa13.5□□□□□ -0.25
MCF2L-230ENST00000491028 ORM1P02763 201 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 ERVFC1-1P60608 527 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms