RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 HRCT1Q6UXD1 115 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 MORN4Q8NDC4 146 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 THEM6Q8WUY1 208 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 MED31Q9Y3C7 131 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 FGD6Q6ZV73 1430 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 CACNA1EQ15878 2313 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.29□□□□□ -2.36
CD46-216ENST00000490278 H3BMG7 143 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 LY6G6CO95867 125 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 EVI2AP22794 236 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 SPINK13Q1W4C9 94 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 LOC285556D6RIA3 1793 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 KNTC1P50748 2209 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 KIAA1549LQ6ZVL6 1849 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 FAM135BQ49AJ0 1406 aa0.29□□□□□ -2.36
CD46-216ENST00000490278 BCORL1Q5H9F3 1711 aa0.28□□□□□ -2.36
CD46-216ENST00000490278 POLR2HP52434 150 aaKnown RBP0.28□□□□□ -2.36
CD46-216ENST00000490278 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.28□□□□□ -2.36
CD46-216ENST00000490278 C19orf12Q9NSK7 152 aa0.28□□□□□ -2.36
CD46-216ENST00000490278 MRPL35Q9NZE8 188 aaKnown RBP0.28□□□□□ -2.36
CD46-216ENST00000490278 APCP25054 2843 aa0.28□□□□□ -2.36
CD46-216ENST00000490278 IFITM5A6NNB3 132 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 IGF2P01344 180 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 SLC25A4P12235 298 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 CRYGSP22914 178 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 FXYD3Q14802 87 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 DEFB132Q7Z7B7 95 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 OR8J3Q8NGG0 315 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 OR51A4Q8NGJ6 313 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 LINC00208Q96KT6 92 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 MRPL36Q9P0J6 103 aaKnown RBP0.27□□□□□ -2.37
CD46-216ENST00000490278 TRAPPC2LQ9UL33 140 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 V9GYQ6 96 aa0.27□□□□□ -2.37
CD46-216ENST00000490278 ASH1LQ9NR48 2969 aaKnown RBP0.26□□□□□ -2.37
CD46-216ENST00000490278 LOC107984640A0A0U1RRK4 108 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 EDF1O60869 148 aaKnown RBP0.26□□□□□ -2.37
CD46-216ENST00000490278 ETV6P41212 452 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 GTF2A1P52655 376 aaPredicted RBP0.26□□□□□ -2.37
CD46-216ENST00000490278 RPL37P61927 97 aaKnown RBP0.26□□□□□ -2.37
CD46-216ENST00000490278 LSM3P62310 102 aaKnown RBP0.26□□□□□ -2.37
CD46-216ENST00000490278 BLCAPP62952 87 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 CBLN4Q9NTU7 201 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 SMPXQ9UHP9 88 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 ANK1P16157 1881 aa0.26□□□□□ -2.37
CD46-216ENST00000490278 TNCP24821 2201 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 TANC2Q9HCD6 1990 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 A2MP01023 1474 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 NBDYA0A0U1RRE5 68 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 A0A1B0GV72 72 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 LOC101927531A0A1B0GV80 90 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 TMEM30CPA0ZSE6 113 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 TMEM189A5PLL7 270 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 HIGD1CA8MV81 97 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 FABP1P07148 127 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 RPL7P18124 248 aaKnown RBP0.25□□□□□ -2.37
CD46-216ENST00000490278 ZNF56Q15929 161 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 C5orf56Q8N8D9 126 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 SMIM7Q9BQ49 75 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 CENPHQ9H3R5 247 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 COMMD3Q9UBI1 195 aa0.25□□□□□ -2.37
CD46-216ENST00000490278 FRAS1Q86XX4 4008 aa0.24□□□□□ -2.37
CD46-216ENST00000490278 SPINK6Q6UWN8 80 aa0.24□□□□□ -2.37
CD46-216ENST00000490278 TOMM20LQ6UXN7 152 aa0.24□□□□□ -2.37
CD46-216ENST00000490278 OR9Q1Q8NGQ5 310 aa0.24□□□□□ -2.37
CD46-216ENST00000490278 BRK1Q8WUW1 75 aa0.24□□□□□ -2.37
CD46-216ENST00000490278 NAV2Q8IVL1 2488 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 M0QZK8 103 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 TPST1O60507 370 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 HBDP02042 147 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 S100A5P33763 92 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 LYPD5Q6UWN5 251 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 OR5A2Q8NGI9 324 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 NAT14Q8WUY8 206 aa0.23□□□□□ -2.37
CD46-216ENST00000490278 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.23□□□□□ -2.37
CD46-216ENST00000490278 FXYD1O00168 92 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 IFNA21P01568 189 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 IGKCP01834 107 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 RPL22P35268 128 aaKnown RBP0.22□□□□□ -2.37
CD46-216ENST00000490278 TFAMQ00059 246 aaKnown RBP0.22□□□□□ -2.37
CD46-216ENST00000490278 RHOHQ15669 191 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 TMEM128Q5BJH2 165 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 SAMD13Q5VXD3 122 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 IDO2Q6ZQW0 420 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 DMAC1Q96GE9 116 aa0.22□□□□□ -2.37
CD46-216ENST00000490278 A0A0G2JMM0 328 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 IL7P13232 177 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 CKS2P33552 79 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 ASB16-AS1Q495Z4 193 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 CCDC115Q96NT0 180 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 PBRM1Q86U86 1689 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 ATG2AQ2TAZ0 1938 aa0.21□□□□□ -2.38
CD46-216ENST00000490278 FER1L6Q2WGJ9 1857 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 TRPM7Q96QT4 1865 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 IGHV1-24A0A0C4DH33 117 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 PGRMC1O00264 195 aaKnown RBP0.2□□□□□ -2.38
CD46-216ENST00000490278 UQCRQO14949 82 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 NEFHP12036 1026 aa0.2□□□□□ -2.38
CD46-216ENST00000490278 OTOSQ8NHW6 89 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms