RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 P01737 135 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 CSN3P07498 182 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 GOLT1BQ9Y3E0 138 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.32□□□□□ -0.92
HDAC6-230ENST00000488543 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 COX19Q49B96 90 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 HIST2H2BDQ6DRA6 164 aa9.32□□□□□ -0.92
HDAC6-230ENST00000488543 LTAP01374 205 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 IGLL1P15814 213 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 ARL3P36405 182 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 HBBP68871 147 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 Q86TA4 180 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 LYPD1Q8N2G4 141 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 UQCR10Q9UDW1 63 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 U3KQE9 123 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 ZNF785A8K8V0 405 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 BUB3O43684 328 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 IGHG4P01861 327 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 RPL7P18124 248 aaKnown RBP9.31□□□□□ -0.92
HDAC6-230ENST00000488543 RAB9AP51151 201 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 PDE6HQ13956 83 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 TPPP3Q9BW30 176 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 JMJD1CQ15652 2540 aa9.31□□□□□ -0.92
HDAC6-230ENST00000488543 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 APOHP02749 345 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-230ENST00000488543 PSMB8P28062 276 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 TMEM86BQ8N661 226 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 TMEM190Q8WZ59 177 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 M0R3E3 92 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 IGLV2-11P01706 119 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 KLF5Q13887 457 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-230ENST00000488543 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 Q6ZSV7 163 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 DAZAP1Q96EP5 407 aaKnown RBP9.3□□□□□ -0.92
HDAC6-230ENST00000488543 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
HDAC6-230ENST00000488543 HSBP1L1C9JCN9 74 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
HDAC6-230ENST00000488543 TSPOP30536 169 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 COL5A1-AS1Q5SY13 56 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 OR4X2Q8NGF9 303 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 FMC1Q96HJ9 113 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 A8MWL6 223 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 TCF21O43680 179 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 S100A7P31151 101 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
HDAC6-230ENST00000488543 A0A087X0K7 114 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 IGHV3-66A0A0C4DH42 116 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 A0A0G2JLM5 398 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 TRBV6-1A0A0K0K1D8 114 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 TMEM89A2RUT3 159 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 RASL11AQ6T310 242 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-230ENST00000488543 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 METTL26Q96S19 204 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 MAST4O15021 2626 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 IGHV3-49A0A0A0MS15 119 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 NDUFA4O00483 81 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 CHEK1O14757 476 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 HILS1P60008 231 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 Q8N2B8 174 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 SMIM12Q96EX1 92 aa9.28□□□□□ -0.92
HDAC6-230ENST00000488543 IGHV3OR16-13A0A075B7E8 117 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 IGHV3-74A0A0B4J1X5 117 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 PSG9Q00887 426 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 IGFL4Q6B9Z1 124 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 RBPMS2Q6ZRY4 209 aaKnown RBP9.27□□□□□ -0.93
HDAC6-230ENST00000488543 OR4C46A6NHA9 309 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 TCTAP57738 103 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 FOXE3Q13461 319 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
HDAC6-230ENST00000488543 LOC102724200A0A096LPH7 203 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-230ENST00000488543 RNASE1P07998 156 aaKnown RBP9.26□□□□□ -0.93
HDAC6-230ENST00000488543 HLA-DMBP28068 263 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 FXYD7P58549 80 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 MYOZ3Q8TDC0 251 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 C2CD3Q4AC94 2353 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 CRIP1P50238 77 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 SCGB2A2Q13296 93 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 FAM106AQ4KMX7 169 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 GLMPQ8WWB7 406 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 TMEM70Q9BUB7 260 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 ZNF492Q9P255 531 aa9.26□□□□□ -0.93
HDAC6-230ENST00000488543 PSG3Q16557 428 aa9.25□□□□□ -0.93
HDAC6-230ENST00000488543 KLHDC1Q8N7A1 406 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms