RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 ADTRPQ96IZ2 230 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 C20orf144Q9BQM9 153 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 WDR61Q9GZS3 305 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 AAMDCQ9H7C9 122 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 RPRMQ9NS64 109 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 PSENENQ9NZ42 101 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 MRPL27Q9P0M9 148 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 APLNQ9ULZ1 77 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 UFC1Q9Y3C8 167 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 URGCP-MRPS24S4R325 110 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 IGHV3OR16-8A0A075B7F1 116 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 A0A087X0K7 114 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 A0A1B0GV90 55 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 OR4C46A6NHA9 309 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 ZFP92A6NM28 416 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF207O43670 478 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 CST7O76096 145 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 MT-CO2P00403 227 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 DEFA4P12838 97 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 TFPI2P48307 235 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 CEBPGP53567 150 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 MFAP2P55001 183 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 PAX9P55771 341 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 CATR1Q13166 79 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 ADIRFQ15847 76 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM14EPQ6UXP3 125 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF818PQ6ZRF7 136 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 GBGT1Q8N5D6 347 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 OR11H2Q8NH07 326 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 CSTL1Q9H114 145 aa4.69□□□□□ -1.66
TMEM39A-209ENST00000486235 IGKV3-7A0A075B6H7 116 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 IGLV11-55A0A075B6I3 123 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 TRBV7-1A0A0A6YYK4 115 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 C20orf202A1L168 122 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 M0R2N4 97 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 KRASP01116 189 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 CRYGCP07315 174 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 TCTAP57738 103 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 YPEL3P61236 119 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 SELENOTP62341 195 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 RPL23P62829 140 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 RPL30P62888 115 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 SLC38A11Q08AI6 406 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF664Q8N3J9 261 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 OR10P1Q8NGE3 313 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 OR4B1Q8NGF8 309 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 OR4A5Q8NH83 315 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM167AQ8TBQ9 72 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF502Q8TBZ5 544 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 C11orf68Q9H3H3 251 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 RBKSQ9H477 322 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 FKBP11Q9NYL4 201 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 NAGKQ9UJ70 344 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 PAM16Q9Y3D7 125 aa4.68□□□□□ -1.66
TMEM39A-209ENST00000486235 IGHV3-49A0A0A0MS15 119 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 IGHV3-21A0A0B4J1V1 117 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 OR2T8A6NH00 312 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 FNDC10F2Z333 226 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 RTL8CO15255 209 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM50AO95807 157 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 CA1P00915 261 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 PSG1P11464 419 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 ATP5IP56385 69 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 TWIST1Q15672 202 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 FAM162BQ5T6X4 162 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 C9orf47Q6ZRZ4 202 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM144Q7Z5S9 345 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF645Q8N7E2 425 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 OR2D3Q8NGH3 330 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 VSTM2AQ8TAG5 236 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 GPR146Q96CH1 333 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 RPUSD4Q96CM3 377 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 MIEN1Q9BRT3 115 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 PARLQ9H300 379 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 DAZ1Q9NQZ3 744 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 PXMP4Q9Y6I8 212 aa4.67□□□□□ -1.66
TMEM39A-209ENST00000486235 IGHV4-4A0A075B6R2 117 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 A0A1B0GV50 99 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 C9JCJ5 164 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 C11orf94C9JXX5 98 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 DLEU1O43261 78 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 HLA-DMBP28068 263 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 RPL8P62917 257 aaKnown RBP4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 Q0VG73 95 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 PDZD11Q5EBL8 140 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 COL5A1-AS1Q5SY13 56 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 GFI1BQ5VTD9 330 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 RASL11AQ6T310 242 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 CD164L2Q6UWJ8 174 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 LCN15Q6UWW0 184 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 TEX43Q6ZNM6 134 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 Q6ZTC4 211 aa4.66□□□□□ -1.66
TMEM39A-209ENST00000486235 OR10G9Q8NGN4 311 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms