RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PAIP2BQ9ULR5 123 aaKnown RBP5.13□□□□□ -1.59
XRN1-212ENST00000486211 TRBV6-4A0A1B0GX49 114 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 TMEM127O75204 238 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 PITX3O75364 302 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 CD3DP04234 171 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 CHTF8P0CG12 524 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 LINC00694P0DN24 101 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 PTTG1IPP53801 180 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 RPL19P84098 196 aaKnown RBP5.12□□□□□ -1.59
XRN1-212ENST00000486211 SRSF9Q13242 221 aaKnown RBP eCLIP5.12□□□□□ -1.59
XRN1-212ENST00000486211 RNASE10Q5GAN6 216 aaKnown RBP5.12□□□□□ -1.59
XRN1-212ENST00000486211 MUC21Q5SSG8 566 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 NIT1Q86X76 327 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 BPIFA4PQ86YQ2 179 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 C7orf33Q8WU49 177 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 UBE2WQ96B02 151 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 MRPL53Q96EL3 112 aaKnown RBP5.12□□□□□ -1.59
XRN1-212ENST00000486211 C2orf50Q96LR7 162 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 PRADC1Q9BSG0 188 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 ARL6Q9H0F7 186 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
XRN1-212ENST00000486211 GAGE12HA6NDE8 117 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 DIRC3C9JPN6 131 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 ZNF253O75346 499 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 TNFAIP8O95379 198 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 OR10J4P0C629 311 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 SELENOTP62341 195 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 RHOHQ15669 191 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 TMEM183BQ1AE95 376 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 LINC00305Q7Z4B0 112 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 LYZL2Q7Z4W2 148 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 SNX29P2Q8IUI4 249 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 TMEM183AQ8IXX5 376 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 SRRQ9GZT4 340 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 RNF24Q9Y225 148 aa5.11□□□□□ -1.59
XRN1-212ENST00000486211 A0A0B4J2A0 478 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 FBLL1A6NHQ2 334 aaKnown RBP5.1□□□□□ -1.59
XRN1-212ENST00000486211 K7EPK0 472 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 M0R2P5 195 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 AKR1C4P17516 323 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 UBE2MP61081 183 aaKnown RBP5.1□□□□□ -1.59
XRN1-212ENST00000486211 NHLH2Q02577 135 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 OR51M1Q9H341 326 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 SHPKQ9UHJ6 478 aa5.1□□□□□ -1.59
XRN1-212ENST00000486211 B5MCH6 92 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 ANKRD65E5RJM6 399 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 SEC11BP0C7V7 166 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 TBPP20226 339 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 POLR2GP62487 172 aaKnown RBP eCLIP5.09□□□□□ -1.59
XRN1-212ENST00000486211 BAK1Q16611 211 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 GUK1Q16774 197 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 SCGB2B2Q4G0G5 96 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 ZNF492Q9P255 531 aa5.09□□□□□ -1.59
XRN1-212ENST00000486211 C14orf166Q9Y224 244 aaKnown RBP5.09□□□□□ -1.59
XRN1-212ENST00000486211 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 IGKV2-40A0A087WW87 121 aaPredicted RBP5.08□□□□□ -1.6
XRN1-212ENST00000486211 LOC100506127A0A0U1RQW1 187 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 H7C1H1 209 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 NDUFB4O95168 129 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 IGKV2D-40P01614 121 aaPredicted RBP5.08□□□□□ -1.6
XRN1-212ENST00000486211 AQP4P55087 323 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 CNBPP62633 177 aaKnown RBP5.08□□□□□ -1.6
XRN1-212ENST00000486211 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 CFAP126Q5VTH2 177 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 ENHOQ6UWT2 76 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 ZNF546Q86UE3 836 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 OR10G9Q8NGN4 311 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 YIPF6Q96EC8 236 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 DPH3Q96FX2 82 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 SH3BGRL3Q9H299 93 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 GPR132Q9UNW8 380 aa5.08□□□□□ -1.6
XRN1-212ENST00000486211 TRBV19A0A075B6N1 114 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 A0A087WWC5 75 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 IGHV3-73A0A0B4J1V6 119 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 H3BP45 60 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 CCSO14618 274 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 TGFBR1P36897 503 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 SLC38A11Q08AI6 406 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 Q0VG73 95 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 ZNF266Q14584 549 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 SURF2Q15527 256 aaPredicted RBP5.07□□□□□ -1.6
XRN1-212ENST00000486211 PRR4Q16378 134 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 SPANXN5Q5MJ07 72 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 Q6AWC8 147 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 CROCCP3Q8IVE0 287 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 CYB561D1Q8N8Q1 229 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 OR51S1Q8NGJ8 323 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 OR52I2Q8NH67 350 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 Q8TAT8 98 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 GTSF1Q8WW33 167 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 CIB3Q96Q77 187 aaPredicted RBP5.07□□□□□ -1.6
XRN1-212ENST00000486211 Q9UF83 564 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 URGCP-MRPS24S4R325 110 aa5.07□□□□□ -1.6
XRN1-212ENST00000486211 MUC21A0A0G2JKD1 596 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 TRBV7-9A0A0J9YWB2 115 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 C5orf51A6NDU8 294 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms