RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TRAPPC2BP0DI82 140 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 HTN1P15515 57 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 NPPCP23582 126 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 CLDN12P56749 244 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 Q499Y3 187 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 RBM48Q5RL73 367 aaKnown RBP2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 LYPD5Q6UWN5 251 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 TMPRSS11AQ6ZMR5 421 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 FOXI2Q6ZQN5 318 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 Q6ZRU5 148 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 Q6ZTI0 123 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 OR11H7Q8NGC8 314 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 VSTM2AQ8TAG5 236 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 APH1BQ8WW43 257 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 LSM10Q969L4 123 aaKnown RBP2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 ISOC2Q96AB3 205 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 CMTM5Q96DZ9 223 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 SMIM19Q96E16 107 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 DNAJC30Q96LL9 226 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 IGF2BP2-AS1Q96M15 143 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 LINC01600Q96MT4 127 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 GINS4Q9BRT9 223 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 TMEM208Q9BTX3 173 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 MAP1LC3CQ9BXW4 147 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 GABARAPL3Q9BY60 117 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 PARD6GQ9BYG4 376 aaPredicted RBP2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 PRRG3Q9BZD7 231 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 COMMD5Q9GZQ3 224 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 DCSTAMPQ9H295 470 aa2.15□□□□□ -2.07
SMARCC1-207ENST00000485833 RAB19A4D1S5 217 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 PPP1R2P9O14990 202 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 FAM107AO95990 144 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 HRASP01112 189 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 IGHV3-53P01767 116 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 HLA-DQB1P01920 261 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 CRYGDP07320 174 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 TSPOP30536 169 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 G6PCP35575 357 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 HTR2BP41595 481 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 SERPINB10P48595 397 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 UBE2MP61081 183 aaKnown RBP2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 SNRPD3P62318 126 aaKnown RBP2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 MRPS15P82914 257 aaKnown RBP2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 COTL1Q14019 142 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 POU2AF1Q16633 256 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 RPL22L1Q6P5R6 122 aaKnown RBP2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 OR1L8Q8NGR8 309 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 OR1P1Q8NH06 330 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 OR51H1Q8NH63 302 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 METTL26Q96S19 204 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 UQCC2Q9BRT2 126 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 GABARAPL1Q9H0R8 117 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 PRELID3BQ9Y3B1 194 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 OR51B2Q9Y5P1 312 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 LY96Q9Y6Y9 160 aa2.14□□□□□ -2.07
SMARCC1-207ENST00000485833 A0A0J9YXV3 536 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 TCRBV3S1A0A5B6 114 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 TMEM235A6NFC5 223 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 H3BNG1 76 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 RBFOX2O43251 390 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 PSCAO43653 123 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 CDK1P06493 297 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 LINC00869P0C866 280 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 NQO2P16083 231 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 CD36P16671 472 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 SYCNQ0VAF6 134 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 LINC00469Q8N7U9 141 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 BAALCQ8WXS3 180 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 DNAJC9Q8WXX5 260 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 HSD17B10Q99714 261 aaKnown RBP2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 CKLFQ9UBR5 152 aa2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 TIMM8BQ9Y5J9 83 aaPredicted RBP2.13□□□□□ -2.07
SMARCC1-207ENST00000485833 TRAV8-2A0A0B4J237 113 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 A0A0U1RQV1 116 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 G3V2T6 193 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 KRASP01116 189 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 IGKV1-39P01597 117 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 IGKV1D-39P04432 117 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 S100A6P06703 90 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 IGLC1P0CG04 106 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 PSMB3P49720 205 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 TAS2R31P59538 309 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 CCDC58Q4VC31 144 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 ZNF818PQ6ZRF7 136 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 HSD17B11Q8NBQ5 300 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 COQ8AQ8NI60 647 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 LGALS14Q8TCE9 139 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 LINC01587Q99440 93 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 BABAM2Q9NXR7 383 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 DOK5Q9P104 306 aa2.12□□□□□ -2.07
SMARCC1-207ENST00000485833 A6NDN8 102 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 IBA57-AS1B1ANH7 110 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 SMKR1H3BMG3 65 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 HPRT1P00492 218 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 IGHV3-30P01768 117 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 IGHV3-33P01772 117 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 IL4P05112 153 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 UBBP0CG47 229 aa2.11□□□□□ -2.07
SMARCC1-207ENST00000485833 IGHV3-30-3P0DP02 117 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms