RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 C8orf49Q96NF6 230 aa19.83■□□□□ 0.76
SHOX2-204ENST00000483851 INAFM1C9JVW0 142 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 SRIP30626 198 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 ZNF138P52744 262 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 IQCJQ1A5X6 159 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 FAM162BQ5T6X4 162 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 AGPAT4-IT1Q9H0P7 198 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 EDN2P20800 178 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 CRIP1P50238 77 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 SLURP1P55000 103 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 DEFB136Q30KP8 78 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 Q6ZWC4 215 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 DCANP1Q8TF63 244 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 C20orf173Q96LM9 149 aa19.82■□□□□ 0.76
SHOX2-204ENST00000483851 TSSC4Q9Y5U2 329 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-204ENST00000483851 TCF21O43680 179 aa19.81■□□□□ 0.76
SHOX2-204ENST00000483851 LINC00477Q96M19 166 aa19.81■□□□□ 0.76
SHOX2-204ENST00000483851 ZNF664Q8N3J9 261 aa19.8■□□□□ 0.76
SHOX2-204ENST00000483851 Q8TAT8 98 aa19.8■□□□□ 0.76
SHOX2-204ENST00000483851 FOXA3P55318 350 aaPredicted RBP19.79■□□□□ 0.76
SHOX2-204ENST00000483851 ERCC8Q13216 396 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 OR2D3Q8NGH3 330 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 OR9G4Q8NGQ1 327 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 TSTD3H0UI37 97 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 CD28P10747 220 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 SRSF2Q01130 221 aaKnown RBP19.79■□□□□ 0.76
SHOX2-204ENST00000483851 OR10J6PQ8NGY7 276 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 RCHY1Q96PM5 261 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 PRO1933Q9H354 126 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 RNF114Q9Y508 228 aa19.79■□□□□ 0.76
SHOX2-204ENST00000483851 GPX1P07203 203 aa19.78■□□□□ 0.76
SHOX2-204ENST00000483851 PRB4P10163 310 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-204ENST00000483851 FHL3Q13643 280 aa19.78■□□□□ 0.76
SHOX2-204ENST00000483851 MS4A6AQ9H2W1 248 aa19.78■□□□□ 0.76
SHOX2-204ENST00000483851 RBPMS2Q6ZRY4 209 aaKnown RBP19.77■□□□□ 0.76
SHOX2-204ENST00000483851 C18orf32Q8TCD1 76 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 TRBV7-9A0A0J9YWB2 115 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 SH2D1AO60880 128 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 PROK1P58294 105 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 KCNS1Q96KK3 526 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 ASCL2Q99929 193 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 NAGKQ9UJ70 344 aa19.77■□□□□ 0.76
SHOX2-204ENST00000483851 CRLF1O75462 422 aa19.76■□□□□ 0.75
SHOX2-204ENST00000483851 DDTP30046 118 aa19.76■□□□□ 0.75
SHOX2-204ENST00000483851 HBBP68871 147 aa19.76■□□□□ 0.75
SHOX2-204ENST00000483851 Q6AWC8 147 aa19.76■□□□□ 0.75
SHOX2-204ENST00000483851 IGKV3-7A0A075B6H7 116 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 FABP5P3A8MUU1 101 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 ALKBH7Q9BT30 221 aaPredicted RBP19.75■□□□□ 0.75
SHOX2-204ENST00000483851 K7EQG2 157 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 SCGB1D1O95968 90 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 CAMPP49913 170 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 RPS20P60866 119 aaKnown RBP19.75■□□□□ 0.75
SHOX2-204ENST00000483851 ADAMTSL5Q6ZMM2 481 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 OR8A1Q8NGG7 326 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 DLX4Q92988 240 aaPredicted RBP19.75■□□□□ 0.75
SHOX2-204ENST00000483851 RAX2Q96IS3 184 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 PGLYRP4Q96LB8 373 aa19.75■□□□□ 0.75
SHOX2-204ENST00000483851 CITED2Q99967 270 aaPredicted RBP19.75■□□□□ 0.75
SHOX2-204ENST00000483851 FLNBO75369 2602 aaKnown RBP19.74■□□□□ 0.75
SHOX2-204ENST00000483851 TRAV2A0A0B4J234 112 aa19.74■□□□□ 0.75
SHOX2-204ENST00000483851 SNRPD3P62318 126 aaKnown RBP19.74■□□□□ 0.75
SHOX2-204ENST00000483851 SSBP4Q9BWG4 385 aaPredicted RBP19.74■□□□□ 0.75
SHOX2-204ENST00000483851 TMEM189A5PLL7 270 aa19.73■□□□□ 0.75
SHOX2-204ENST00000483851 HAX1O00165 279 aa19.73■□□□□ 0.75
SHOX2-204ENST00000483851 CCL24O00175 119 aa19.73■□□□□ 0.75
SHOX2-204ENST00000483851 CD33P20138 364 aa19.73■□□□□ 0.75
SHOX2-204ENST00000483851 HIST1H1AQ02539 215 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-204ENST00000483851 SAMD10Q9BYL1 202 aa19.73■□□□□ 0.75
SHOX2-204ENST00000483851 ZNF80P51504 273 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-204ENST00000483851 CSN3P07498 182 aa19.71■□□□□ 0.75
SHOX2-204ENST00000483851 ZNF324O75467 553 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-204ENST00000483851 C14orf144Q96I85 54 aa19.71■□□□□ 0.75
SHOX2-204ENST00000483851 DUX3Q96PT4 197 aa19.71■□□□□ 0.75
SHOX2-204ENST00000483851 DEFA6Q01524 100 aa19.7■□□□□ 0.74
SHOX2-204ENST00000483851 C11orf44Q8N8P7 122 aa19.7■□□□□ 0.74
SHOX2-204ENST00000483851 WFDC3Q8IUB2 231 aa19.69■□□□□ 0.74
SHOX2-204ENST00000483851 FAM19A4Q96LR4 140 aa19.69■□□□□ 0.74
SHOX2-204ENST00000483851 SIGLEC8Q9NYZ4 499 aa19.69■□□□□ 0.74
SHOX2-204ENST00000483851 LINC01559Q495D7 138 aa19.69■□□□□ 0.74
SHOX2-204ENST00000483851 NF1P21359 2839 aa19.68■□□□□ 0.74
SHOX2-204ENST00000483851 AMTP48728 403 aa19.68■□□□□ 0.74
SHOX2-204ENST00000483851 TEX43Q6ZNM6 134 aa19.68■□□□□ 0.74
SHOX2-204ENST00000483851 NIT1Q86X76 327 aa19.68■□□□□ 0.74
SHOX2-204ENST00000483851 GATD1Q8NB37 220 aa19.68■□□□□ 0.74
SHOX2-204ENST00000483851 NSD1Q96L73 2696 aaPredicted RBP19.68■□□□□ 0.74
SHOX2-204ENST00000483851 SETXQ7Z333 2677 aaKnown RBP19.67■□□□□ 0.74
SHOX2-204ENST00000483851 A0A1B0GW15 77 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 Q8N976 141 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 HIVEP1P15822 2718 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 KIR2DL5BA0A0G2JN68 375 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 KIR2DL5BA0A0G2JPC4 375 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 A0A1W2PRX2 142 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 APRG1Q8IVJ8 170 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 KIR2DL5AQ8N109 375 aa19.67■□□□□ 0.74
SHOX2-204ENST00000483851 ZNF705DP0CH99 300 aaPredicted RBP19.66■□□□□ 0.74
SHOX2-204ENST00000483851 ZNF705BP0CI00 300 aaPredicted RBP19.66■□□□□ 0.74
SHOX2-204ENST00000483851 DYNLRB2Q8TF09 96 aa19.66■□□□□ 0.74
SHOX2-204ENST00000483851 ODF3Q96PU9 254 aa19.66■□□□□ 0.74
SHOX2-204ENST00000483851 SELENOKQ9Y6D0 94 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms