RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 KRTAP10-1P60331 282 aa9.48□□□□□ -0.89
VARS-226ENST00000483275 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
VARS-226ENST00000483275 GUK1Q16774 197 aa9.48□□□□□ -0.89
VARS-226ENST00000483275 EIF4E3Q8N5X7 224 aaKnown RBP9.48□□□□□ -0.89
VARS-226ENST00000483275 CHAC2Q8WUX2 184 aa9.48□□□□□ -0.89
VARS-226ENST00000483275 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
VARS-226ENST00000483275 GIPP09681 153 aaPredicted RBP9.47□□□□□ -0.89
VARS-226ENST00000483275 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 TCL1AP56279 114 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 Q5VSD8 79 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 Q8TAT8 98 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 VGLL1Q99990 258 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
VARS-226ENST00000483275 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
VARS-226ENST00000483275 RGS13O14921 159 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 GPX1P07203 203 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 ICAM4Q14773 271 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 LYPD1Q8N2G4 141 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
VARS-226ENST00000483275 ST6GAL2Q96JF0 529 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 TIMM9Q9Y5J7 89 aa9.46□□□□□ -0.9
VARS-226ENST00000483275 A0A087WTM6 91 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 ZNF253O75346 499 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 SMR3BP02814 79 aaPredicted RBP9.45□□□□□ -0.9
VARS-226ENST00000483275 SFTA3P0C7M3 94 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 SLC25A2Q9BXI2 301 aa9.45□□□□□ -0.9
VARS-226ENST00000483275 EREGO14944 169 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
VARS-226ENST00000483275 CRYBA4P53673 196 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 FHL2Q14192 279 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 LYPD5Q6UWN5 251 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 INO80EQ8NBZ0 244 aaPredicted RBP9.44□□□□□ -0.9
VARS-226ENST00000483275 LINC00477Q96M19 166 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
VARS-226ENST00000483275 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 CRISP2P16562 243 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 PHYHIPLQ96FC7 376 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 ARPC5LQ9BPX5 153 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 MRPL32Q9BYC8 188 aaKnown RBP9.43□□□□□ -0.9
VARS-226ENST00000483275 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
VARS-226ENST00000483275 FXYD6-FXYD2A0A087WZ82 144 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 OR10J4P0C629 311 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 ZNF266Q14584 549 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 IBA57Q5T440 356 aaKnown RBP9.42□□□□□ -0.9
VARS-226ENST00000483275 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 OR2T35Q8NGX2 323 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 ZNF479Q96JC4 524 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 FAM167A-AS1Q96KT0 104 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 AAMDCQ9H7C9 122 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
VARS-226ENST00000483275 TRGV4A0A0C4DH28 118 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 PDE6HQ13956 83 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 MRPL23Q16540 153 aaKnown RBP9.41□□□□□ -0.9
VARS-226ENST00000483275 CDPF1Q6NVV7 123 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 FRZBQ92765 325 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 MSRB1Q9NZV6 116 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
VARS-226ENST00000483275 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 K7EQD1 137 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 GYPEP15421 78 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 SRIP30626 198 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 TAS2R45P59539 299 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
VARS-226ENST00000483275 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 WFDC1Q9HC57 220 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
VARS-226ENST00000483275 A0A1W2PPV4 95 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 OR7C2O60412 319 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
VARS-226ENST00000483275 ZNF138P52744 262 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 TMEM183BQ1AE95 376 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 TMEM183AQ8IXX5 376 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 FXYD5Q96DB9 178 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
VARS-226ENST00000483275 BORCS7-ASMTA0A0B4J1R7 106 aa9.38□□□□□ -0.91
VARS-226ENST00000483275 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
VARS-226ENST00000483275 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
VARS-226ENST00000483275 Q5BKY6 102 aa9.38□□□□□ -0.91
VARS-226ENST00000483275 HSD17B11Q8NBQ5 300 aa9.38□□□□□ -0.91
VARS-226ENST00000483275 PCNPQ8WW12 178 aaKnown RBP9.38□□□□□ -0.91
VARS-226ENST00000483275 CRYGDP07320 174 aa9.37□□□□□ -0.91
VARS-226ENST00000483275 NMBP08949 121 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms