RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 STOML3Q8TAV4 291 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 SLC35B3Q9H1N7 401 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 Q9H3A6 140 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 AAMDCQ9H7C9 122 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 XCL2Q9UBD3 114 aa4.87□□□□□ -1.63
SCN9A-206ENST00000472119 TENM3Q9P273 2699 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 A0A1B0GV50 99 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 PGPA6NDG6 321 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 CXorf1O96002 111 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 NUTF2P61970 127 aaKnown RBP4.86□□□□□ -1.63
SCN9A-206ENST00000472119 ERCC8Q13216 396 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 AMTNQ6UX39 209 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 SLC51BQ86UW2 128 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 OR10J6PQ8NGY7 276 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 FAM213BQ8TBF2 198 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 RNF183Q96D59 192 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 PPP1R14DQ9NXH3 145 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 PRELID1Q9Y255 219 aa4.86□□□□□ -1.63
SCN9A-206ENST00000472119 TRAV12-2A0A075B6T6 113 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 IGHV3OR16-12A0A075B7B8 117 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 IGKV2-40A0A087WW87 121 aaPredicted RBP4.85□□□□□ -1.63
SCN9A-206ENST00000472119 MAP1LC3B2A6NCE7 125 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 M0R2Z0 102 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 IGKV2D-40P01614 121 aaPredicted RBP4.85□□□□□ -1.63
SCN9A-206ENST00000472119 CT45A10P0DMU9 189 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 CSN1S1P47710 185 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 UBE2G2P60604 165 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 LYPD1Q8N2G4 141 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 CSNK1G2-AS1Q8NCQ2 148 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 MRPL53Q96EL3 112 aaKnown RBP4.85□□□□□ -1.63
SCN9A-206ENST00000472119 RARRES2Q99969 163 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 VGLL1Q99990 258 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 MAP1LC3BQ9GZQ8 125 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 AGPAT4-IT1Q9H0P7 198 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 OTORQ9NRC9 128 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 TMEM167BQ9NRX6 74 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 RPH3ALQ9UNE2 315 aa4.85□□□□□ -1.63
SCN9A-206ENST00000472119 A8MTW9 85 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 BOLA2-SMG1P6H3BVE0 249 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 J3KRW8 73 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 PRM2P04554 102 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 SLC25A5P05141 298 aaKnown RBP4.84□□□□□ -1.63
SCN9A-206ENST00000472119 GNG5P63218 68 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 FAM74A1Q5RGS3 127 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 EIF5AL1Q6IS14 154 aaKnown RBP4.84□□□□□ -1.63
SCN9A-206ENST00000472119 CMTM2Q8TAZ6 248 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 SUN5Q8TC36 379 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 MBD3L1Q8WWY6 194 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 C1QTNF4Q9BXJ3 329 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
SCN9A-206ENST00000472119 YTHDF2Q9Y5A9 579 aaKnown RBP4.84□□□□□ -1.63
SCN9A-206ENST00000472119 STAB2Q8WWQ8 2551 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 A0A0J9YWU9 116 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 A0A1W2PRE2 83 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 DEFB4AO15263 64 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 CRXO43186 299 aaPredicted RBP4.83□□□□□ -1.64
SCN9A-206ENST00000472119 SULT1A2P50226 295 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 CCL20P78556 96 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 TMEM78Q5T7P6 136 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 ALKAL2Q6UX46 152 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 DPPA3Q6W0C5 159 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 GOLT1AQ6ZVE7 132 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 C1orf158Q8N1D5 194 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 Q8TAT8 98 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 RXFP4Q8TDU9 374 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 SGK494Q96LW2 274 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 IGF2BP2-AS1Q96M15 143 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 TMEM208Q9BTX3 173 aa4.83□□□□□ -1.64
SCN9A-206ENST00000472119 TRAV8-1A0A0A6YYK1 113 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 A0A1B0GVY2 172 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 FAM74A7A6NL05 159 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF705EA8MWA4 302 aaPredicted RBP4.82□□□□□ -1.64
SCN9A-206ENST00000472119 GGTLC3B5MD39 225 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 INSP01308 110 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 AMBPP02760 352 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 RBMY1A1P0DJD3 496 aaKnown RBP4.82□□□□□ -1.64
SCN9A-206ENST00000472119 RBMY1CP0DJD4 496 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 HTN1P15515 57 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 TSPOP30536 169 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 RNASE4P34096 147 aaKnown RBP4.82□□□□□ -1.64
SCN9A-206ENST00000472119 LEPP41159 167 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 CDKN1BP46527 198 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 RAB5CP51148 216 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF138P52744 262 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 RBMY1FQ15415 496 aaKnown RBP4.82□□□□□ -1.64
SCN9A-206ENST00000472119 CST9LP1Q5W188 147 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF705AQ6ZN79 300 aaPredicted RBP4.82□□□□□ -1.64
SCN9A-206ENST00000472119 C5orf17Q8NAS9 161 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 LINC01587Q99440 93 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF492Q9P255 531 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms