RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CYB561D1Q8N8Q1 229 aa14.1□□□□□ -0.15
HDAC7-220ENST00000471235 TVP23CQ96ET8 276 aa14.1□□□□□ -0.15
HDAC7-220ENST00000471235 SGK494Q96LW2 274 aa14.1□□□□□ -0.15
HDAC7-220ENST00000471235 K7EQM0 130 aa14.09□□□□□ -0.15
HDAC7-220ENST00000471235 H2AFB1P0C5Y9 115 aa14.09□□□□□ -0.15
HDAC7-220ENST00000471235 RAB5CP51148 216 aa14.09□□□□□ -0.15
HDAC7-220ENST00000471235 ZNF493Q6ZR52 646 aa14.09□□□□□ -0.15
HDAC7-220ENST00000471235 NKX6-2Q9C056 277 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-220ENST00000471235 ARL2-SNX15V9GYD0 113 aa14.09□□□□□ -0.15
HDAC7-220ENST00000471235 KMT2CQ8NEZ4 4911 aaKnown RBP14.08□□□□□ -0.15
HDAC7-220ENST00000471235 F6UZH7 168 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 PEX7O00628 323 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 IFNA7P01567 189 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 IGLV2-11P01706 119 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 TMEM75Q8N9X5 138 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 LINC00467Q9BRT7 94 aa14.08□□□□□ -0.16
HDAC7-220ENST00000471235 TRAV10A0A0B4J240 114 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 C11orf94C9JXX5 98 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 PAGE4O60829 102 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 ATP5G3P48201 142 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 Q6AWC8 147 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 CCDC28AQ8IWP9 274 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 TREM1Q9NP99 234 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 PSG8Q9UQ74 426 aa14.07□□□□□ -0.16
HDAC7-220ENST00000471235 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-220ENST00000471235 LYRM9A8MSI8 78 aa14.06□□□□□ -0.16
HDAC7-220ENST00000471235 FLI1Q01543 452 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-220ENST00000471235 CST9LP1Q5W188 147 aa14.06□□□□□ -0.16
HDAC7-220ENST00000471235 EIF4E3Q8N5X7 224 aaKnown RBP14.06□□□□□ -0.16
HDAC7-220ENST00000471235 NDFIP1Q9BT67 221 aa14.06□□□□□ -0.16
HDAC7-220ENST00000471235 PLECQ15149 4684 aaKnown RBP14.06□□□□□ -0.16
HDAC7-220ENST00000471235 IGHV1OR15-1A0A075B7D0 117 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 CBY3A6NI87 242 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 RGS13O14921 159 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 PRNTQ86SH4 94 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 HIST1H2BAQ96A08 127 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 LINC00479Q96M42 142 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 C8orf49Q96NF6 230 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 BOLA1Q9Y3E2 137 aa14.05□□□□□ -0.16
HDAC7-220ENST00000471235 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-220ENST00000471235 TRAV1-1A0A0B4J248 108 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 FBLL1A6NHQ2 334 aaKnown RBP14.04□□□□□ -0.16
HDAC7-220ENST00000471235 DAD1P61803 113 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 ANXA2RQ3ZCQ2 193 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 Q86TA4 180 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 C11orf72Q8NBR9 251 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 ZNF680Q8NEM1 530 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 TCEAL7Q9BRU2 100 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 NOP10Q9NPE3 64 aaKnown RBP14.04□□□□□ -0.16
HDAC7-220ENST00000471235 TP53TG3Q9ULZ0 132 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 LYSTQ99698 3801 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 ALMS1Q8TCU4 4167 aa14.04□□□□□ -0.16
HDAC7-220ENST00000471235 DEFB131BA0A096LNP1 70 aa14.03□□□□□ -0.16
HDAC7-220ENST00000471235 PPT1P50897 306 aa14.03□□□□□ -0.16
HDAC7-220ENST00000471235 CCL20P78556 96 aa14.03□□□□□ -0.16
HDAC7-220ENST00000471235 MUC21Q5SSG8 566 aa14.03□□□□□ -0.16
HDAC7-220ENST00000471235 C2CD4CQ8TF44 421 aa14.03□□□□□ -0.16
HDAC7-220ENST00000471235 SNURFLB1AK76 121 aa14.02□□□□□ -0.17
HDAC7-220ENST00000471235 ALKAL2Q6UX46 152 aa14.02□□□□□ -0.17
HDAC7-220ENST00000471235 TRAV21A0A0B4J279 112 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 LCE6AA0A183 80 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 DEFB130BP0DP73 79 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 DEFB130AP0DP74 79 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 ZNF80P51504 273 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-220ENST00000471235 MANBALQ9NQG1 85 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 GNG13Q9P2W3 67 aa14.01□□□□□ -0.17
HDAC7-220ENST00000471235 TEX46H3BTG2 121 aa14□□□□□ -0.17
HDAC7-220ENST00000471235 AKR1C3P42330 323 aa14□□□□□ -0.17
HDAC7-220ENST00000471235 TCL1AP56279 114 aa14□□□□□ -0.17
HDAC7-220ENST00000471235 IBA57Q5T440 356 aaKnown RBP14□□□□□ -0.17
HDAC7-220ENST00000471235 LINC00612Q8N6U2 182 aa14□□□□□ -0.17
HDAC7-220ENST00000471235 NAGKQ9UJ70 344 aa14□□□□□ -0.17
HDAC7-220ENST00000471235 SCO2A0A1W2PP80 73 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 IGLL5B9A064 214 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 GCGP01275 180 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 HTN3P15516 51 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 DAZ2Q13117 558 aaKnown RBP13.99□□□□□ -0.17
HDAC7-220ENST00000471235 SMUG1Q53HV7 270 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 SAPCD1Q5SSQ6 148 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 FMC1Q96HJ9 113 aa13.99□□□□□ -0.17
HDAC7-220ENST00000471235 SACSQ9NZJ4 4579 aa13.98□□□□□ -0.17
HDAC7-220ENST00000471235 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
HDAC7-220ENST00000471235 TDRG1Q3Y452 100 aa13.98□□□□□ -0.17
HDAC7-220ENST00000471235 FAM159AQ6UWV7 190 aa13.98□□□□□ -0.17
HDAC7-220ENST00000471235 KLF12Q9Y4X4 402 aa13.98□□□□□ -0.17
HDAC7-220ENST00000471235 IGHV4-4A0A075B6R2 117 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 TRBV6-1A0A0K0K1D8 114 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 UBE2G1P62253 170 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 TMEM183BQ1AE95 376 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 Q6ZTI0 123 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 TMEM183AQ8IXX5 376 aa13.97□□□□□ -0.17
HDAC7-220ENST00000471235 DNAH1Q9P2D7 4330 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 TRGV11A0A075B6L2 103 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 GAGE12BA1L429 117 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 GAGE7O76087 117 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
HDAC7-220ENST00000471235 GAGE12FP0CL80 117 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 GAGE12GP0CL81 117 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms