RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 LCN15Q6UWW0 184 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 UBE2DNLQ8IWF7 75 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 C6orf223Q8N319 242 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 RNF182Q8N6D2 247 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 TMEM252Q8N6L7 170 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 MGST2Q99735 147 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 SLC50A1Q9BRV3 221 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 CELA1Q9UNI1 258 aa4.15□□□□□ -1.75
VARS-222ENST00000470953 DEFB131BA0A096LNP1 70 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 A0A0J9YX75 114 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 TEX48A0A1B0GUV7 120 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 IGSF23A1L1A6 192 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 TMEM189A5PLL7 270 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 PMS2P5A8MQ11 134 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 C17orf112F2Z3M2 114 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 SOCS3O14543 225 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 MPDU1O75352 247 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 MT-ND4LP03901 98 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 CXCL2P19875 107 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 HOXA5P20719 270 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 CNN1P51911 297 aaKnown RBP4.14□□□□□ -1.75
VARS-222ENST00000470953 PLP1P60201 277 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 ATP6V1FQ16864 119 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 SPINK13Q1W4C9 94 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 GDF5OSQ5U4N7 250 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 MIC13Q5XKP0 118 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 IGFL4Q6B9Z1 124 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 ATRAIDQ6UW56 229 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 TMEM182Q6ZP80 229 aaPredicted RBP4.14□□□□□ -1.75
VARS-222ENST00000470953 MTURNQ8N3F0 131 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 OR5C1Q8NGR4 320 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 OR10J6PQ8NGY7 276 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 THAP6Q8TBB0 222 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 ASB13Q8WXK3 278 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 C20orf173Q96LM9 149 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 NMES1Q9C002 83 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 SLC35B3Q9H1N7 401 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 SLC39A9Q9NUM3 307 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 RFNGQ9Y644 331 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 PXMP4Q9Y6I8 212 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
VARS-222ENST00000470953 A0A087X0K7 114 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 SMIM9A6NGZ8 99 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 ZNF705EA8MWA4 302 aaPredicted RBP4.13□□□□□ -1.75
VARS-222ENST00000470953 H3BTX0 84 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 M0R2Z0 102 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 MPC2O95563 127 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 IFNA5P01569 189 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 SNRPCP09234 159 aaKnown RBP4.13□□□□□ -1.75
VARS-222ENST00000470953 GIG44P09565 113 aaPredicted RBP4.13□□□□□ -1.75
VARS-222ENST00000470953 SPART-AS1P0CW21 52 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 HTN3P15516 51 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 CXCL3P19876 107 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 FGF8P55075 233 aaPredicted RBP4.13□□□□□ -1.75
VARS-222ENST00000470953 OPCMLQ14982 345 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 PEA15Q15121 130 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 FCN2Q15485 313 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 RRN3P1Q2M238 152 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 FAM74A1Q5RGS3 127 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 BAP18Q8IXM2 172 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 SCGB1C1Q8TD33 95 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 RXFP4Q8TDU9 374 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 PPP1R1CQ8WVI7 109 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 RPUSD4Q96CM3 377 aaKnown RBP4.13□□□□□ -1.75
VARS-222ENST00000470953 NPCDR1Q9BY65 106 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 AAMDCQ9H7C9 122 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 DNAJC4Q9NNZ3 241 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 SMCO4Q9NRQ5 59 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 WDR83OSQ9Y284 106 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 ZFP30Q9Y2G7 519 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 TIMM9Q9Y5J7 89 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 X6R8D5 127 aa4.13□□□□□ -1.75
VARS-222ENST00000470953 OR7C2O60412 319 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 NPSP0C0P6 89 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 ZNF705DP0CH99 300 aaPredicted RBP4.12□□□□□ -1.75
VARS-222ENST00000470953 ZNF705BP0CI00 300 aaPredicted RBP4.12□□□□□ -1.75
VARS-222ENST00000470953 HTN1P15515 57 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 TSPOP30536 169 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
VARS-222ENST00000470953 UBE2G2P60604 165 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 ICAM4Q14773 271 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 LGALSLQ3ZCW2 172 aaPredicted RBP4.12□□□□□ -1.75
VARS-222ENST00000470953 DMRTA1Q5VZB9 504 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 EIF5AL1Q6IS14 154 aaKnown RBP4.12□□□□□ -1.75
VARS-222ENST00000470953 OR11H7Q8NGC8 314 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 OR8A1Q8NGG7 326 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 BLNKQ8WV28 456 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 ATP5SQ99766 215 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 SMIM3Q9BZL3 60 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 MED28Q9H204 178 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 OR5AC2Q9NZP5 309 aa4.12□□□□□ -1.75
VARS-222ENST00000470953 TRAV12-2A0A075B6T6 113 aa4.11□□□□□ -1.75
VARS-222ENST00000470953 TRAV8-2A0A0B4J237 113 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms