RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 GATA3P23771 443 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 LY6DQ14210 128 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 PSG3Q16557 428 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 ZNF833PQ6ZTB9 187 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 C3orf56Q8N813 242 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 LINC00477Q96M19 166 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 MRPL27Q9P0M9 148 aaKnown RBP8.47□□□□□ -1.05
CHD3-208ENST00000470531 CYSLTR1Q9Y271 337 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 PHLDA3Q9Y5J5 127 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 EFNA4P52798 201 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
CHD3-208ENST00000470531 IGKV1D-37A0A075B6S9 117 aa8.46□□□□□ -1.05
CHD3-208ENST00000470531 HBDP02042 147 aa8.46□□□□□ -1.05
CHD3-208ENST00000470531 ZNF562Q6V9R5 426 aa8.46□□□□□ -1.05
CHD3-208ENST00000470531 SOX21Q9Y651 276 aaPredicted RBP8.46□□□□□ -1.05
CHD3-208ENST00000470531 TRAV40A0A0B4J280 105 aa8.46□□□□□ -1.05
CHD3-208ENST00000470531 TMEM158Q8WZ71 300 aa8.46□□□□□ -1.05
CHD3-208ENST00000470531 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.05
CHD3-208ENST00000470531 PCSK5Q92824 1860 aa8.46□□□□□ -1.06
CHD3-208ENST00000470531 IGKV1-17P01599 117 aa8.46□□□□□ -1.06
CHD3-208ENST00000470531 PRSS2P07478 247 aa8.46□□□□□ -1.06
CHD3-208ENST00000470531 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
CHD3-208ENST00000470531 TRGV9Q99603 122 aa8.46□□□□□ -1.06
CHD3-208ENST00000470531 DUX5Q96PT3 197 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
CHD3-208ENST00000470531 PSMB2P49721 201 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 TMEM155Q4W5P6 130 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 IL17RELQ6ZVW7 336 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 PTPRBP23467 1997 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 A4D1N5 150 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 K7EP34 96 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 SMIM13P0DJ93 91 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
CHD3-208ENST00000470531 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
CHD3-208ENST00000470531 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 IGKV3D-20A0A0C4DH25 116 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 M0QXV9 152 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 Q6ZS92 163 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
CHD3-208ENST00000470531 MBD6Q96DN6 1003 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 DLX6P56179 175 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 NEU4Q8WWR8 484 aaPredicted RBP8.44□□□□□ -1.06
CHD3-208ENST00000470531 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
CHD3-208ENST00000470531 TRGV3P03979 118 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 EGR2P11161 476 aaPredicted RBP8.44□□□□□ -1.06
CHD3-208ENST00000470531 SAMD5Q5TGI4 173 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 TEX36Q5VZQ5 186 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
CHD3-208ENST00000470531 FABP5P3A8MUU1 101 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 F6UB75 175 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 THBDP07204 575 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 MAPK1IP1LQ8NDC0 245 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 METTL26Q96S19 204 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 GAS8-AS1O95177 125 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 ZNF292O60281 2723 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 PRAC2D3DTV9 90 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 CGB3P0DN86 165 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 CGB7P0DN87 165 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 NPC2P61916 151 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 ZNF491Q8N8L2 437 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 WIPF2Q8TF74 440 aaPredicted RBP8.43□□□□□ -1.06
CHD3-208ENST00000470531 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 RAXQ9Y2V3 346 aa8.43□□□□□ -1.06
CHD3-208ENST00000470531 GP9P14770 177 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 ATP5IP56385 69 aaPredicted RBP8.42□□□□□ -1.06
CHD3-208ENST00000470531 VMO1Q7Z5L0 202 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 SMAD7O15105 426 aaKnown RBP8.42□□□□□ -1.06
CHD3-208ENST00000470531 SEC11AP67812 179 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 ZNF747Q9BV97 191 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 C1QTNF4Q9BXJ3 329 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 EPG5Q9HCE0 2579 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 SHANK2-AS3Q9BTD1 123 aa8.42□□□□□ -1.06
CHD3-208ENST00000470531 A0A087WWL8 130 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 TMEM8BA6NDV4 472 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 OR11H12B2RN74 326 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 LTAP01374 205 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 GATA4P43694 442 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 C11orf44Q8N8P7 122 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 OR11H1Q8NG94 326 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
CHD3-208ENST00000470531 IGLV2-23P01705 113 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
CHD3-208ENST00000470531 Q6ZQT7 251 aa8.41□□□□□ -1.06
CHD3-208ENST00000470531 TCTEX1D4Q5JR98 221 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms