RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 Q8TAT8 98 aa12.31□□□□□ -0.44
LINC00888-201ENST00000468380 PFDN5Q99471 154 aa12.31□□□□□ -0.44
LINC00888-201ENST00000468380 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
LINC00888-201ENST00000468380 FLVCR2Q9UPI3 526 aa12.31□□□□□ -0.44
LINC00888-201ENST00000468380 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
LINC00888-201ENST00000468380 PPT1P50897 306 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 PDE6HQ13956 83 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 SPXQ9BT56 116 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
LINC00888-201ENST00000468380 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
LINC00888-201ENST00000468380 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
LINC00888-201ENST00000468380 RAB31Q13636 194 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 TMEM183AQ8IXX5 376 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 C12orf45Q8N5I9 185 aaPredicted RBP12.29□□□□□ -0.44
LINC00888-201ENST00000468380 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 PKHD1L1Q86WI1 4243 aa12.29□□□□□ -0.44
LINC00888-201ENST00000468380 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 CST7O76096 145 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 ZNF138P52744 262 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 Q8N3U1 123 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 V9GYH0 126 aa12.28□□□□□ -0.44
LINC00888-201ENST00000468380 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.45
LINC00888-201ENST00000468380 ZNF266Q14584 549 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 CIRBP-AS1Q8TBR5 109 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 CHAC1Q9BUX1 264 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.45
LINC00888-201ENST00000468380 TRBV7-9A0A0J9YWB2 115 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 VWC2Q2TAL6 325 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 DEDD2Q8WXF8 326 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 UQCC1Q9NVA1 299 aa12.26□□□□□ -0.45
LINC00888-201ENST00000468380 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
LINC00888-201ENST00000468380 GNRH2O43555 120 aa12.25□□□□□ -0.45
LINC00888-201ENST00000468380 NDUFB6O95139 128 aa12.25□□□□□ -0.45
LINC00888-201ENST00000468380 Q6AWC8 147 aa12.25□□□□□ -0.45
LINC00888-201ENST00000468380 C11orf1Q9H5F2 150 aa12.25□□□□□ -0.45
LINC00888-201ENST00000468380 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
LINC00888-201ENST00000468380 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 LAGE3Q14657 143 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 CHAC2Q8WUX2 184 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 C20orf85Q9H1P6 137 aa12.24□□□□□ -0.45
LINC00888-201ENST00000468380 GPN1Q9HCN4 374 aaPredicted RBP12.24□□□□□ -0.45
LINC00888-201ENST00000468380 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 L7N2F9 121 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 M0R2P5 195 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 BCAP31P51572 246 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
LINC00888-201ENST00000468380 TMBIM6P55061 237 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 VAMP2P63027 116 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 LELP1Q5T871 98 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
LINC00888-201ENST00000468380 MRPS26Q9BYN8 205 aaKnown RBP12.23□□□□□ -0.45
LINC00888-201ENST00000468380 UBE2L5PA0A1B0GUS4 154 aa12.22□□□□□ -0.45
LINC00888-201ENST00000468380 CAV2P51636 162 aa12.22□□□□□ -0.45
LINC00888-201ENST00000468380 BAXQ07812 192 aa12.22□□□□□ -0.45
LINC00888-201ENST00000468380 TDRG1Q3Y452 100 aa12.22□□□□□ -0.45
LINC00888-201ENST00000468380 MIR17HGQ75NE6 70 aa12.22□□□□□ -0.45
LINC00888-201ENST00000468380 LSM5Q9Y4Y9 91 aaKnown RBP12.22□□□□□ -0.45
LINC00888-201ENST00000468380 RNF213Q63HN8 5207 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 CCSO14618 274 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 BAK1Q16611 211 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 FXYD5Q96DB9 178 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 PHYHIPLQ96FC7 376 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
LINC00888-201ENST00000468380 LRP2P98164 4655 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 H3BMQ9 156 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 OR10J4P0C629 311 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 FGF7P21781 194 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 DAZAP1Q96EP5 407 aaKnown RBP12.2□□□□□ -0.46
LINC00888-201ENST00000468380 BCL7BQ9BQE9 202 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 OR51M1Q9H341 326 aa12.2□□□□□ -0.46
LINC00888-201ENST00000468380 RBFOX3A6NFN3 312 aa12.19□□□□□ -0.46
LINC00888-201ENST00000468380 MT1HL1P0DM35 61 aa12.19□□□□□ -0.46
LINC00888-201ENST00000468380 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
LINC00888-201ENST00000468380 GTSF1LQ9H1H1 148 aa12.19□□□□□ -0.46
LINC00888-201ENST00000468380 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
LINC00888-201ENST00000468380 IGSF23A1L1A6 192 aa12.18□□□□□ -0.46
LINC00888-201ENST00000468380 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
LINC00888-201ENST00000468380 RNF222A6NCQ9 220 aa12.18□□□□□ -0.46
LINC00888-201ENST00000468380 FBLL1A6NHQ2 334 aaKnown RBP12.18□□□□□ -0.46
LINC00888-201ENST00000468380 S100A11P31949 105 aa12.18□□□□□ -0.46
LINC00888-201ENST00000468380 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
LINC00888-201ENST00000468380 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
LINC00888-201ENST00000468380 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
LINC00888-201ENST00000468380 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms