RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SNRNP200O75643 2136 aaKnown RBP1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 OR2H2O95918 312 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 CCL4P13236 92 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 CKS2P33552 79 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 SPATA45Q537H7 98 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 LINC00299Q6ZSB3 139 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 MAFIPQ8WZ33 124 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 LZICQ8WZA0 190 aa1.11□□□□□ -2.23
PRPF40A-205ENST00000467114 DNAJB13P59910 316 aa1.1□□□□□ -2.23
PRPF40A-205ENST00000467114 IZUMO2Q6UXV1 221 aa1.1□□□□□ -2.23
PRPF40A-205ENST00000467114 GSKIPQ9P0R6 139 aa1.1□□□□□ -2.23
PRPF40A-205ENST00000467114 FGD6Q6ZV73 1430 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 A0A0J9YY99 117 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 IFITM5A6NNB3 132 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 EDF1O60869 148 aaKnown RBP1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 SMIM24O75264 130 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 SULT1C4O75897 302 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 IGLV3-1P01715 115 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 HIST1H1BP16401 226 aaKnown RBP1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 CKS1BP61024 79 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 PCBD1P61457 104 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 CCSMST1Q4G0I0 132 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 OCIAD2Q56VL3 154 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 TCTEX1D1Q8N7M0 179 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 OR4S1Q8NGB4 309 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 OTOSQ8NHW6 89 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 SMIM7Q9BQ49 75 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 LIMD2Q9BT23 127 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 BANF2Q9H503 90 aa1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 BOKQ9UMX3 212 aaPredicted RBP1.09□□□□□ -2.23
PRPF40A-205ENST00000467114 ERBINQ96RT1 1412 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 IGHV1-24A0A0C4DH33 117 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 A0A1W2PPB8 328 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 A0A1W2PRS3 328 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 KIR3DP1A8MWS1 328 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 CD14P08571 375 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 EFNA4P52798 201 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 FXYD4P59646 89 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 QRFPP83859 136 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 MORN2Q502X0 79 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 C3orf62Q6ZUJ4 267 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 C10orf111Q8N326 155 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 OR10AC1Q8NH08 325 aa1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 MAGOHBQ96A72 148 aaKnown RBP1.08□□□□□ -2.24
PRPF40A-205ENST00000467114 KMT2BQ9UMN6 2715 aaPredicted RBP1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 PNMA8CA0A1B0GUJ8 204 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 ZNF727A8MUV8 499 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 ASB16-AS1Q495Z4 193 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 TMEM91Q6ZNR0 172 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 SBSPONQ8IVN8 264 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 LPAR5Q9H1C0 372 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 E9PCH4 1651 aa1.07□□□□□ -2.24
PRPF40A-205ENST00000467114 FHAD1B1AJZ9 1412 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 TET1Q8NFU7 2136 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 MUC4Q99102 2169 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 IGHV3-30P01768 117 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 IGHV3-30-5P0DP03 117 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 HLA-DRB4P13762 266 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 PDE6GP18545 87 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 SNRPD3P62318 126 aaKnown RBP1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 CSAG1Q6PB30 78 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 OR8J3Q8NGG0 315 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 METTL1Q9UBP6 276 aaKnown RBP1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 DNAJC15Q9Y5T4 150 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 HLA-DRB4X5D2U9 266 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 ROS1P08922 2347 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 MED12Q93074 2177 aa1.06□□□□□ -2.24
PRPF40A-205ENST00000467114 COL1A1P02452 1464 aaPredicted RBP1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 USP54Q70EL1 1684 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 CDC42EP2O14613 210 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 KDELR1P24390 212 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 AKR1D1P51857 326 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 HIST1H1AQ02539 215 aaPredicted RBP1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 SMCO1Q147U7 214 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 IDO2Q6ZQW0 420 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 COMMD3Q9UBI1 195 aa1.05□□□□□ -2.24
PRPF40A-205ENST00000467114 PEAK1Q9H792 1746 aa1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 CD3DP04234 171 aa1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 GYPBP06028 91 aa1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 PTPRDP23468 1912 aa1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 EML5Q05BV3 1969 aa1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 PHRF1Q9P1Y6 1649 aaKnown RBP1.04□□□□□ -2.24
PRPF40A-205ENST00000467114 TMEM30CPA0ZSE6 113 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 A6NN06 94 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 RPL37AP61513 92 aaKnown RBP1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 PLGLB1Q02325 96 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 RHOHQ15669 191 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 MMGT1Q8N4V1 131 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 SMIM3Q9BZL3 60 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 SLC35B3Q9H1N7 401 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 MRPL36Q9P0J6 103 aaKnown RBP1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 ARHGAP31Q2M1Z3 1444 aa1.03□□□□□ -2.24
PRPF40A-205ENST00000467114 MYH1P12882 1939 aa1.03□□□□□ -2.25
PRPF40A-205ENST00000467114 NINQ8N4C6 2090 aa1.03□□□□□ -2.25
PRPF40A-205ENST00000467114 ASCC3Q8N3C0 2202 aaKnown RBP1.03□□□□□ -2.25
PRPF40A-205ENST00000467114 M0R2Z0 102 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 RBP4P02753 201 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 MPC1LP0DKB6 136 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 IL7P13232 177 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms