RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 Q6ZSN1 163 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 SLC35B3Q9H1N7 401 aa10.33□□□□□ -0.76
HMGXB4-206ENST00000466438 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 FAM74A7A6NL05 159 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 FAM229AH3BQW9 127 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 GALR1P47211 349 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 MEOX2P50222 304 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 SRSF3P84103 164 aaKnown RBP10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 FAM222AQ5U5X8 452 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF705AQ6ZN79 300 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 TCEAL7Q9BRU2 100 aa10.32□□□□□ -0.76
HMGXB4-206ENST00000466438 SMIM9A6NGZ8 99 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 K7EQG2 157 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 BUB3O43684 328 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 SMR3BP02814 79 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 NBEAP1P0C6P0 100 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF688P0C7X2 276 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 NUTF2P61970 127 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 PDE6HQ13956 83 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF705FA8MVS1 300 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 F8W036 122 aa10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF705DP0CH99 300 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF705BP0CI00 300 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 TTC32Q5I0X7 151 aa10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 SEC11CQ9BY50 192 aa10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 YTHDF2Q9Y5A9 579 aaKnown RBP10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 U3KQE9 123 aa10.3□□□□□ -0.76
HMGXB4-206ENST00000466438 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 ZNF253O75346 499 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 ATP5G3P48201 142 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 CCL18P55774 89 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 PSG9Q00887 426 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
HMGXB4-206ENST00000466438 TRBV19A0A075B6N1 114 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 A0A087X0K7 114 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 HELTA6NFD8 242 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 CEBPGP53567 150 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 C16orf54Q6UWD8 224 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 SIGLEC15Q6ZMC9 328 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 RPUSD4Q96CM3 377 aaKnown RBP10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 AAMDCQ9H7C9 122 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
HMGXB4-206ENST00000466438 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 RANP62826 216 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 SAMD13Q5VXD3 122 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 C5orf17Q8NAS9 161 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 CMTM2Q8TAZ6 248 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 SLC50A1Q9BRV3 221 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 Q9H3A6 140 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 ZNF586Q9NXT0 402 aa10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 CARHSP1Q9Y2V2 147 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-206ENST00000466438 C9JQL5 133 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 H3BQ15 152 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 DAD1P61803 113 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 CCDC28AQ8IWP9 274 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 SVBPQ8N300 66 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 GLMPQ8WWB7 406 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 Q9H8V8 135 aa10.26□□□□□ -0.77
HMGXB4-206ENST00000466438 APOC3P02656 99 aa10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 SLC25A5P05141 298 aaKnown RBP10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 C10orf91Q5T1B1 145 aa10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 PARLQ9H300 379 aa10.25□□□□□ -0.77
HMGXB4-206ENST00000466438 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 SCO2A0A1W2PP80 73 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 PGPA6NDG6 321 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 K7EQM0 130 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 EREGO14944 169 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 NUDT3O95989 172 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 AKR1C3P42330 323 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 CSN1S1P47710 185 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 ZNF674Q2M3X9 581 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 PSMG4Q5JS54 123 aa10.24□□□□□ -0.77
HMGXB4-206ENST00000466438 PRELID1Q9Y255 219 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms