RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 S100A10P60903 97 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 BAXQ07812 192 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 IL15RAQ13261 267 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 BTN1A1Q13410 526 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 ZNF846Q147U1 533 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 PQLC2Q6ZP29 291 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 S100A7AQ86SG5 101 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 EXOC3-AS1Q8N2X6 119 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 C12orf45Q8N5I9 185 aaPredicted RBP3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 TMEM252Q8N6L7 170 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 MAPKAPK5-AS1Q8N8E1 139 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 RXFP4Q8TDU9 374 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 C2orf50Q96LR7 162 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 GGACTQ9BVM4 153 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 AGPAT4-IT1Q9H0P7 198 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 C20orf85Q9H1P6 137 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 SLC39A9Q9NUM3 307 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 WDR83OSQ9Y284 106 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 PXMP4Q9Y6I8 212 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 PKD1P98161 4303 aa3.23□□□□□ -1.89
GTF3C3-208ENST00000455546 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 TRBV19A0A075B6N1 114 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 TRGV2A0A075B6R0 118 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 IGKV2-40A0A087WW87 121 aaPredicted RBP3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 A0A096LPF7 62 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 UBE2L5PA0A1B0GUS4 154 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 C7orf71A4D174 169 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 EIF3GO75821 320 aaKnown RBP eCLIP3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 SIX6O95475 246 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 IGKV2D-40P01614 121 aaPredicted RBP3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 GPX1P07203 203 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 CXCL2P19875 107 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 FGF7P21781 194 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 S100A11P31949 105 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 LEPP41159 167 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 RPL29P47914 159 aaKnown RBP3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 CAMPP49913 170 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 RAB31Q13636 194 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 VWC2Q2TAL6 325 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 PAPPA-AS1Q5QFB9 102 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 PRR9Q5T870 116 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 FAM122CQ6P4D5 195 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 NEXN-AS1Q8NBZ9 246 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 OR1L4Q8NGR5 311 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 THAP6Q8TBB0 222 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 VGLL1Q99990 258 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 C20orf144Q9BQM9 153 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 PYGO2Q9BRQ0 406 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 SLC25A2Q9BXI2 301 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 NUDT15Q9NV35 164 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 UQCC1Q9NVA1 299 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 RNF24Q9Y225 148 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 TIMM9Q9Y5J7 89 aa3.22□□□□□ -1.89
GTF3C3-208ENST00000455546 PRAF2O60831 178 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 MPDU1O75352 247 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 SLC25A5P05141 298 aaKnown RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 OR10J4P0C629 311 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 NBEAP1P0C6P0 100 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 PVALBP20472 110 aaPredicted RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 SULT1A1P50225 295 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 DAZ2Q13117 558 aaKnown RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 GUK1Q16774 197 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 CNPY1Q3B7I2 92 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 LRRC37A5PQ49AS3 106 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 MIR17HGQ75NE6 70 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 FAM167A-AS1Q96KT0 104 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 FAM19A4Q96LR4 140 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 LINC00477Q96M19 166 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 PFDN5Q99471 154 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 GPN1Q9HCN4 374 aaPredicted RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 SCRT2Q9NQ03 307 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 LYRM2Q9NU23 88 aaPredicted RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 MRPL16Q9NX20 251 aaKnown RBP3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 FUT9Q9Y231 359 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 PAM16Q9Y3D7 125 aa3.21□□□□□ -1.9
GTF3C3-208ENST00000455546 HSPG2P98160 4391 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 FAM240BA0A1B0GVZ2 78 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 hDV102S1A0JD36 115 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 KLLNB2CW77 178 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 E5RGE8 158 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 H3BNG1 76 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 SIVA1O15304 175 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 SPINK4O60575 86 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF253O75346 499 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 SFTA3P0C7M3 94 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 TCL1AP56279 114 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 LINC00315P59091 139 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 RANP62826 216 aaKnown RBP3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 HBG1P69891 147 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 HBG2P69892 147 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 ATP6V1FQ16864 119 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 MUC21Q5SSG8 566 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms