RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 LOC100506127A0A0U1RQW1 187 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SMIM31A0A1B0GVY4 71 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 C7orf71A4D174 169 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 RBFOX3A6NFN3 312 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 C9JCJ5 164 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 J3KRW8 73 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 K7EPK0 472 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SLC17A3O00476 420 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 LECT2O14960 151 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 MPDU1O75352 247 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 HYPMO75409 117 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 CCNKO75909 580 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 IL5P05113 134 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 NMBP08949 121 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SFTA3P0C7M3 94 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 IGLC2P0DOY2 106 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 CRISP2P16562 243 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 TGFBR1P36897 503 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 RAB11AP62491 216 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 ZNF846Q147U1 533 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SMCO1Q147U7 214 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 ZC2HC1BQ5TFG8 222 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 CYP2G1PQ6ZSU1 146 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SH2D6Q7Z4S9 175 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 LYZL2Q7Z4W2 148 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 SNX29P2Q8IUI4 249 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 Q8N976 141 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 OR10G4Q8NGN3 311 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 LRRC20Q8TCA0 184 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 PCNPQ8WW12 178 aaKnown RBP2.35□□□□□ -2.03
RBM39-220ENST00000455343 TMEM37Q8WXS4 190 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 LINC01600Q96MT4 127 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 MRPL16Q9NX20 251 aaKnown RBP2.35□□□□□ -2.03
RBM39-220ENST00000455343 TP53TG3Q9ULZ0 132 aa2.35□□□□□ -2.03
RBM39-220ENST00000455343 IGHV1OR15-1A0A075B7D0 117 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 TRAV8-6A0A0B4J262 113 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 H3BQ15 152 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 ZNF253O75346 499 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 TNFAIP8O95379 198 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 RAB3DO95716 219 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 IGHV3-30P01768 117 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 IGHV3-33P01772 117 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 SNRPCP09234 159 aaKnown RBP2.34□□□□□ -2.03
RBM39-220ENST00000455343 OR5G3P0C626 314 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 LINC00869P0C866 280 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 IGHV3-30-5P0DP03 117 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 SLC25A6P12236 298 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 AKR1C4P17516 323 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 KRTAP10-8P60410 259 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 SELENOTP62341 195 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 BTN1A1Q13410 526 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 SCGB2B2Q4G0G5 96 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 PRR9Q5T870 116 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 Q6ZQT7 251 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 S100A7AQ86SG5 101 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 BPIFA4PQ86YQ2 179 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 ZFAND2AQ8N6M9 145 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 TMEM229BQ8NBD8 167 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 OR10P1Q8NGE3 313 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 OR52I2Q8NH67 350 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 BAALCQ8WXS3 180 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 MRPL53Q96EL3 112 aaKnown RBP2.34□□□□□ -2.03
RBM39-220ENST00000455343 LINC00477Q96M19 166 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 SLC25A31Q9H0C2 315 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 AGPAT4-IT1Q9H0P7 198 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 ARV1Q9H2C2 271 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 RNF24Q9Y225 148 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 PXMP4Q9Y6I8 212 aa2.34□□□□□ -2.03
RBM39-220ENST00000455343 TRAV4A0A0B4J268 109 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 TRBV7-9A0A0J9YWB2 115 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 A0A0J9YXV3 536 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 DUXBA0A1W2PPF3 345 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 H3BTX0 84 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 PANO1I0J062 215 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 M0R3E3 92 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 SYNGR2O43760 224 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 PFN1P07737 140 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 OR4E1P0C645 316 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 IAPPP10997 89 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 GATA1P15976 413 aaPredicted RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 ANXA7P20073 488 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 PPT1P50897 306 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 TAS2R19P59542 299 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 POLR2GP62487 172 aaKnown RBP eCLIP2.33□□□□□ -2.04
RBM39-220ENST00000455343 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 AKR1C1Q04828 323 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 ERCC8Q13216 396 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 OPCMLQ14982 345 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 GUK1Q16774 197 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 OR10J3Q5JRS4 329 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 FAAP20Q6NZ36 180 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 ATRAIDQ6UW56 229 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 LINC00305Q7Z4B0 112 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 DAZ4Q86SG3 579 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 OR51S1Q8NGJ8 323 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms