RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CREBBPQ92793 2442 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 PRR25Q96S07 402 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 NDFIP1Q9BT67 221 aa3.64□□□□□ -1.83
RIF1-207ENST00000454583 NCBP2LA6PVI3 153 aaKnown RBP3.63□□□□□ -1.83
RIF1-207ENST00000454583 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 OR9G4Q8NGQ1 327 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 C18orf32Q8TCD1 76 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 HIGD1AQ9Y241 93 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 A0A1W2PPV4 95 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 A0A1W2PS18 150 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 PGPA6NDG6 321 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 ACTL6BO94805 426 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 CBLN1P23435 193 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 Q6AWC8 147 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 OR4B1Q8NGF8 309 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 DUX5Q96PT3 197 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 SAV1Q9H4B6 383 aaPredicted RBP3.63□□□□□ -1.83
RIF1-207ENST00000454583 LINC00587B1AMM8 73 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 PRAC2D3DTV9 90 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 LINC01619G3V211 115 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 H7BYZ3 331 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 IGHV3-23P01764 117 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 CNN1P51911 297 aaKnown RBP3.63□□□□□ -1.83
RIF1-207ENST00000454583 LINC00315P59091 139 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 UBE2L3P68036 154 aaKnown RBP3.63□□□□□ -1.83
RIF1-207ENST00000454583 ATP5G2Q06055 141 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 RAB31Q13636 194 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 WDR73Q6P4I2 378 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 EXOC3-AS1Q8N2X6 119 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 PTH2Q96A98 100 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 BTF3L4Q96K17 158 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 ZFP30Q9Y2G7 519 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 S4R3C0 116 aa3.63□□□□□ -1.83
RIF1-207ENST00000454583 TRGV3P03979 118 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 SUMO1P63165 101 aaKnown RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 RPEL1Q2QD12 228 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 TM4SF20Q53R12 229 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 CLEC19AQ6UXS0 136 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ZFAND2AQ8N6M9 145 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 NEU1Q99519 415 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ENY2Q9NPA8 101 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 AURKAIP1Q9NWT8 199 aaPredicted RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 KIF25-AS1Q9Y6Z4 181 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 TRAV25A0A0B4J276 109 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 FBLL1A6NHQ2 334 aaKnown RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 COX7A2P2O60397 106 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 GPX1P07203 203 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 LINC00694P0DN24 101 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 GNG4P50150 75 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ECSCRQ19T08 205 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 DEFB136Q30KP8 78 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 IBA57Q5T440 356 aaKnown RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 Q6ZQT7 251 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ZNF664Q8N3J9 261 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 C8orf49Q96NF6 230 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 SPAG8Q99932 426 aaPredicted RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 RPP21Q9H633 154 aaKnown RBP3.62□□□□□ -1.83
RIF1-207ENST00000454583 EDA2RQ9HAV5 297 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 URGCP-MRPS24S4R325 110 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 IGKV3D-20A0A0C4DH25 116 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 A0A0G2JLM5 398 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 MT-ND6P03923 174 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 RD3LP0DJH9 198 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 GPR183P32249 361 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ARL3P36405 182 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 JMJD8Q96S16 334 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 ZMAT4Q9H898 229 aa3.62□□□□□ -1.83
RIF1-207ENST00000454583 SPG11Q96JI7 2443 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 IGHV3-21A0A0B4J1V1 117 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 TRAV34A0A0B4J273 112 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 CA1P00915 261 aaPredicted RBP3.61□□□□□ -1.83
RIF1-207ENST00000454583 CT45A10P0DMU9 189 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 RPS10P46783 165 aaKnown RBP3.61□□□□□ -1.83
RIF1-207ENST00000454583 TPPP2P59282 170 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 COX19Q49B96 90 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 PDZD11Q5EBL8 140 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
RIF1-207ENST00000454583 FAM104AQ969W3 186 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 DAZ1Q9NQZ3 744 aaKnown RBP3.61□□□□□ -1.83
RIF1-207ENST00000454583 HNF1AP20823 631 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 HLA-DMBP28068 263 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 C11orf72Q8NBR9 251 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 OR1N2Q8NGR9 330 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 VGLL1Q99990 258 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 NAT8BQ9UHF3 227 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 NBEAL1Q6ZS30 2694 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 TRAV8-1A0A0A6YYK1 113 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 SCGB2A2Q13296 93 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 HES1Q14469 280 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 MRPL52Q86TS9 123 aaKnown RBP3.61□□□□□ -1.83
RIF1-207ENST00000454583 OR8I2Q8N0Y5 310 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 OR11H1Q8NG94 326 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 C14orf144Q96I85 54 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 MS4A6AQ9H2W1 248 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 LENEPQ9Y5L5 61 aa3.61□□□□□ -1.83
RIF1-207ENST00000454583 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 LOC102724200A0A096LPH7 203 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms