RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 HIST1H2BDP58876 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BCP62807 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 FABP9Q0Z7S8 132 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST2H2BEQ16778 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.69□□□□□ -0.7
USP39-207ENST00000450066 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 ATP5L2Q7Z4Y8 100 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BHQ93079 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BNQ99877 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 HIST1H2BMQ99879 126 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
USP39-207ENST00000450066 XKRY2A2RUG3 117 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 S100A6P06703 90 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 FRMD6-AS1P0C7T7 363 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 GZMBP10144 247 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 DEFB114Q30KQ6 69 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
USP39-207ENST00000450066 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
USP39-207ENST00000450066 MT-ND6P03923 174 aa10.67□□□□□ -0.7
USP39-207ENST00000450066 Q6AWC8 147 aa10.67□□□□□ -0.7
USP39-207ENST00000450066 NDUFA11Q86Y39 141 aa10.67□□□□□ -0.7
USP39-207ENST00000450066 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
USP39-207ENST00000450066 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
USP39-207ENST00000450066 PGLYRP4Q96LB8 373 aa10.67□□□□□ -0.7
USP39-207ENST00000450066 SNURFLB1AK76 121 aa10.66□□□□□ -0.7
USP39-207ENST00000450066 NSUN5P1Q3KNT7 163 aa10.66□□□□□ -0.7
USP39-207ENST00000450066 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
USP39-207ENST00000450066 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
USP39-207ENST00000450066 A0A0J9YX75 114 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 CRISP2P16562 243 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
USP39-207ENST00000450066 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 C5orf52A6NGY3 159 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 ORM1P02763 201 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 SNRPEP62304 92 aaKnown RBP10.65□□□□□ -0.7
USP39-207ENST00000450066 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
USP39-207ENST00000450066 GDF5OSQ5U4N7 250 aa10.65□□□□□ -0.7
USP39-207ENST00000450066 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 RAB4BP61018 213 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 HBBP68871 147 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 PRR9Q5T870 116 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 EBLN2Q6P2I7 272 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
USP39-207ENST00000450066 FOXI2Q6ZQN5 318 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
USP39-207ENST00000450066 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
USP39-207ENST00000450066 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
USP39-207ENST00000450066 GPX1P07203 203 aa10.63□□□□□ -0.71
USP39-207ENST00000450066 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.63□□□□□ -0.71
USP39-207ENST00000450066 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
USP39-207ENST00000450066 TENM1Q9UKZ4 2725 aa10.63□□□□□ -0.71
USP39-207ENST00000450066 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
USP39-207ENST00000450066 CD33P20138 364 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 CAMPP49913 170 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 NDUFA6P56556 154 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 KLLNB2CW77 178 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
USP39-207ENST00000450066 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
USP39-207ENST00000450066 A0A1B0GW15 77 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 J3KRW8 73 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 RNASE4P34096 147 aaKnown RBP10.61□□□□□ -0.71
USP39-207ENST00000450066 RIGQ13278 110 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 BORCS7Q96B45 105 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 UBE2CO00762 179 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 APCSP02743 223 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 CTRLP40313 264 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 LEPP41159 167 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 DEFB131AP59861 70 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 Q6ZQT7 251 aa10.61□□□□□ -0.71
USP39-207ENST00000450066 SAP30O75446 220 aa10.6□□□□□ -0.71
USP39-207ENST00000450066 S100A8P05109 93 aa10.6□□□□□ -0.71
USP39-207ENST00000450066 GRIFINA4D1Z8 144 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 HOXA5P20719 270 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 SLAQ13239 276 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 COA6Q5JTJ3 125 aaKnown RBP10.59□□□□□ -0.71
USP39-207ENST00000450066 MAP6D1Q9H9H5 199 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 SORL1Q92673 2214 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 F2Z2F3 143 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 PF4P02776 101 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 HLA-DRB4P13762 266 aa10.59□□□□□ -0.71
USP39-207ENST00000450066 TSPOP30536 169 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms