RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 SLC50A1Q9BRV3 221 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 C11orf68Q9H3H3 251 aaKnown RBP6.38□□□□□ -1.39
USP6NL-203ENST00000443016 IGLC2P0DOY2 106 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 PSG9Q00887 426 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 BLNKQ8WV28 456 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 TXNDC17Q9BRA2 123 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 NKX6-2Q9C056 277 aaPredicted RBP6.38□□□□□ -1.39
USP6NL-203ENST00000443016 AAMDCQ9H7C9 122 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
USP6NL-203ENST00000443016 ZNF253O75346 499 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 BCL2P10415 239 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 LINC00052Q96N35 136 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 A0A1W2PRE2 83 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
USP6NL-203ENST00000443016 NDUFA5Q16718 116 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 LYPD1Q8N2G4 141 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 ZNF503Q96F45 646 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
USP6NL-203ENST00000443016 C1QTNF4Q9BXJ3 329 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 EIF5A2Q9GZV4 153 aaKnown RBP6.37□□□□□ -1.39
USP6NL-203ENST00000443016 TMPRSS5Q9H3S3 457 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 MED9Q9NWA0 146 aa6.37□□□□□ -1.39
USP6NL-203ENST00000443016 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 MIFP14174 115 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 ZNF586Q9NXT0 402 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 VAX2Q9UIW0 290 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 RBFOX3A6NFN3 312 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 H3BQ15 152 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 PRYO14603 147 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 GIG44P09565 113 aaPredicted RBP6.36□□□□□ -1.39
USP6NL-203ENST00000443016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 CMTM2Q8TAZ6 248 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 TCEAL7Q9BRU2 100 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 XCL2Q9UBD3 114 aa6.36□□□□□ -1.39
USP6NL-203ENST00000443016 LINC00862A6NCI5 91 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 C11orf94C9JXX5 98 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 ISLRO14498 428 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 CSN1S1P47710 185 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 RANP62826 216 aaKnown RBP6.35□□□□□ -1.39
USP6NL-203ENST00000443016 CCL20P78556 96 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 MEF2BQ02080 365 aaPredicted RBP6.35□□□□□ -1.39
USP6NL-203ENST00000443016 PEA15Q15121 130 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 C6orf226Q5I0X4 101 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 COMMD7Q86VX2 200 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 Q8NAQ8 132 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 OR4B1Q8NGF8 309 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 Q9H3A6 140 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 SAV1Q9H4B6 383 aaPredicted RBP6.35□□□□□ -1.39
USP6NL-203ENST00000443016 OTORQ9NRC9 128 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 FAM74A7A6NL05 159 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 F6UZH7 168 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 H3BMM0 161 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 H3BTX0 84 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 ZNF506Q5JVG8 444 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 SMDT1Q9H4I9 107 aa6.35□□□□□ -1.39
USP6NL-203ENST00000443016 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
USP6NL-203ENST00000443016 IGLL5B9A064 214 aa6.34□□□□□ -1.39
USP6NL-203ENST00000443016 PDE6DO43924 150 aa6.34□□□□□ -1.39
USP6NL-203ENST00000443016 SLC25A5P05141 298 aaKnown RBP6.34□□□□□ -1.39
USP6NL-203ENST00000443016 SNRPCP09234 159 aaKnown RBP6.34□□□□□ -1.39
USP6NL-203ENST00000443016 HLA-DRB4P13762 266 aa6.34□□□□□ -1.39
USP6NL-203ENST00000443016 RXFP4Q8TDU9 374 aa6.34□□□□□ -1.39
USP6NL-203ENST00000443016 YTHDF2Q9Y5A9 579 aaKnown RBP6.34□□□□□ -1.39
USP6NL-203ENST00000443016 HLA-DRB4X5D2U9 266 aa6.34□□□□□ -1.39
USP6NL-203ENST00000443016 IGHV3OR16-12A0A075B7B8 117 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 SLC17A3O00476 420 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.4
USP6NL-203ENST00000443016 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 HLA-DMBP28068 263 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 DEFB1P60022 68 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 ICAM4Q14773 271 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 RBMY1FQ15415 496 aaKnown RBP6.34□□□□□ -1.4
USP6NL-203ENST00000443016 EBLN2Q6P2I7 272 aa6.34□□□□□ -1.4
USP6NL-203ENST00000443016 PGPA6NDG6 321 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 GGTLC3B5MD39 225 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 NDUFB4O95168 129 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 FXYD7P58549 80 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 FOXI2Q6ZQN5 318 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 RPUSD4Q96CM3 377 aaKnown RBP6.33□□□□□ -1.4
USP6NL-203ENST00000443016 C17orf77Q96MU5 243 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 ATP5G3P48201 142 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 LGALS9CQ6DKI2 356 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF738Q8NE65 137 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 HIST1H2BAQ96A08 127 aa6.33□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM250H0YL14 139 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 SOCS3O14543 225 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 AKR1C3P42330 323 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 EMP1P54849 157 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 Q6ZTC4 211 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms