RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 ZNF253O75346 499 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 NDUFB4O95168 129 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 PRSS1P07477 247 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 OR10J4P0C629 311 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 GAGE1Q13065 139 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 GAGE4Q13068 117 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 GAGE5Q13069 117 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 RHOHQ15669 191 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 TMEM78Q5T7P6 136 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 WDR73Q6P4I2 378 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 YIPF6Q96EC8 236 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
SMPD4-208ENST00000439029 TRGV11A0A075B6L2 103 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 TRBV19A0A075B6N1 114 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 ANKRD65E5RJM6 399 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 NMBP08949 121 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 METTL15P1P0C7V9 234 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 POLR2GP62487 172 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMPD4-208ENST00000439029 GUK1Q16774 197 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 SDIM1Q6ZPB5 146 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 CLVS1Q8IUQ0 354 aaPredicted RBP6.15□□□□□ -1.42
SMPD4-208ENST00000439029 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
SMPD4-208ENST00000439029 C2orf50Q96LR7 162 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 NPVFQ9HCQ7 196 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 PSENENQ9NZ42 101 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 TIMM9Q9Y5J7 89 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 URGCP-MRPS24S4R325 110 aa6.15□□□□□ -1.42
SMPD4-208ENST00000439029 A0A087WYN8 130 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 K7EPK0 472 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 HOXB5P09067 269 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 PYYP10082 97 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 HIST1H1EP10412 219 aaKnown RBP6.14□□□□□ -1.43
SMPD4-208ENST00000439029 ANXA3P12429 323 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 NCS1P62166 190 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 SRPXP78539 464 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 PXDC1Q5TGL8 231 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 FAM159AQ6UWV7 190 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 DPPA3Q6W0C5 159 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 ZNF546Q86UE3 836 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 MGST2Q99735 147 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 Q9UF83 564 aa6.14□□□□□ -1.43
SMPD4-208ENST00000439029 TRBV6-4A0A1B0GX49 114 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 SSSCA1O60232 199 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 AKAIN1P0CW23 69 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 ZNF138P52744 262 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 ZNF266Q14584 549 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 C4orf46Q504U0 113 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 CFAP126Q5VTH2 177 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 MIC13Q5XKP0 118 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 NIT1Q86X76 327 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 PRRT1Q99946 306 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 MGAT4CQ9UBM8 478 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 RABL2BQ9UNT1 228 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 PRELID1Q9Y255 219 aa6.13□□□□□ -1.43
SMPD4-208ENST00000439029 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
SMPD4-208ENST00000439029 ARL16Q0P5N6 197 aa6.12□□□□□ -1.43
SMPD4-208ENST00000439029 RAB31Q13636 194 aa6.12□□□□□ -1.43
SMPD4-208ENST00000439029 GTSF1Q8WW33 167 aa6.12□□□□□ -1.43
SMPD4-208ENST00000439029 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
SMPD4-208ENST00000439029 MCUBQ9NWR8 336 aa6.12□□□□□ -1.43
SMPD4-208ENST00000439029 DUXBA0A1W2PPF3 345 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 TYMSP04818 313 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 SLC25A6P12236 298 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 VAMP1P23763 118 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 CAV2P51636 162 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 VBP1P61758 197 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 ZNF876PQ49A33 203 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 SAMD10Q9BYL1 202 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 AAMDCQ9H7C9 122 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 GPN1Q9HCN4 374 aaPredicted RBP6.11□□□□□ -1.43
SMPD4-208ENST00000439029 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SMPD4-208ENST00000439029 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
SMPD4-208ENST00000439029 Q6AWC8 147 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 DGAT2L7PQ6IED9 249 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 ATRAIDQ6UW56 229 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 ENHOQ6UWT2 76 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 TMEM14EPQ6UXP3 125 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 Q6ZRG5 221 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 CYB561D1Q8N8Q1 229 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 OR2T35Q8NGX2 323 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 SCGB3A2Q96PL1 93 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 RAB26Q9ULW5 256 aa6.1□□□□□ -1.43
SMPD4-208ENST00000439029 A0A087WX48 190 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 LINC00694P0DN24 101 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 CAMLGP49069 296 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 ID3Q02535 119 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 MZT2AQ6P582 158 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 LYPD6BQ8NI32 183 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 SCP2D1Q9UJQ7 156 aa6.09□□□□□ -1.43
SMPD4-208ENST00000439029 A0A087WWC5 75 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms